RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SOX15O60248 233 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 MMP23AO75900 390 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 IGHV2-5P01817 119 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 GABRR1P24046 479 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 ATP5OP48047 213 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TFPI2P48307 235 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TAF6P49848 677 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 ACLYP53396 1101 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 CDH6P55285 790 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 ARFRP1Q13795 201 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 ARHGAP19Q14CB8 494 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 C1orf94Q6P1W5 598 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TRIM40Q6P9F5 258 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 BIVMQ86UB2 503 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 MFSD6LQ8IWD5 586 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 C11orf42Q8N5U0 333 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 B3GNT7Q8NFL0 401 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 OR6C4Q8NGE1 309 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 NEIL3Q8TAT5 605 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 PLPPR1Q8TBJ4 325 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TSEN15Q8WW01 171 aaKnown RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 PIBF1Q8WXW3 757 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 ZNF578Q96N58 590 aaPredicted RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TSNARE1Q96NA8 513 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 MS4A4EQ96PG1 132 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TGS1Q96RS0 853 aaKnown RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TMEM246Q9BRR3 403 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 NAT9Q9BTE0 207 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 ANP32EQ9BTT0 268 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 RIOK2Q9BVS4 552 aaKnown RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 POLR2J2Q9GZM3 115 aaKnown RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 POLR2J3Q9H1A7 115 aaKnown RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 MRPL47Q9HD33 250 aaKnown RBP2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 GLRX2Q9NS18 164 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 MMP17Q9ULZ9 603 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 TRAF3IP3Q9Y228 551 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 NEUROG3Q9Y4Z2 214 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 CDH10Q9Y6N8 788 aa2.9□□□□□ -1.95
RNU2-28P-201ENST00000410457 IGLV3-22A0A075B6J6 115 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 IGLV3-10A0A075B6K4 115 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 A0A0J9YXY3 114 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TRBV11-1A0A0K0K1C0 115 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 SMCO3A2RU48 225 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 PSMB11A5LHX3 300 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 OR2AG2A6NM03 316 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 CCL21O00585 134 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 DYNC1I1O14576 645 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 HDAC3O15379 428 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 CDH16O75309 829 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 ERLIN2O94905 339 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 FTH1P02794 183 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 ABOP16442 354 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TCN1P20061 433 aaPredicted RBP2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 COX7A1P24310 79 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 SYKP43405 635 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 APOC4P55056 127 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TAS2R19P59542 299 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 MRPS22P82650 360 aaKnown RBP2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TGFBR3Q03167 851 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 GPNMBQ14956 572 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 SLC8B1Q6J4K2 584 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 BZW1Q7L1Q6 419 aaKnown RBP2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 CENPQQ7L2Z9 268 aaPredicted RBP2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 SMARCD2Q92925 531 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 UCN3Q969E3 161 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 HSFY1Q96LI6 401 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TECTBQ96PL2 329 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 PLEKHF1Q96S99 279 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TSG101Q99816 390 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 PELOQ9BRX2 385 aaKnown RBP2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 MTG1Q9BT17 334 aaPredicted RBP2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 RACGAP1Q9H0H5 632 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 OR51J1Q9H342 316 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 RNF167Q9H6Y7 350 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 TMEM185BQ9H7F4 350 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 ZNF160Q9HCG1 818 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 INPP5EQ9NRR6 644 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 EXD2Q9NVH0 621 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 QPCTLQ9NXS2 382 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 MMP24Q9Y5R2 645 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 KIF25-AS1Q9Y6Z4 181 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 THSD7BQ9C0I4 1608 aa2.89□□□□□ -1.95
RNU2-28P-201ENST00000410457 C12orf77C9JDV5 145 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 GOSR2O14653 212 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 MGRN1O60291 552 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 CTAG2O75638 210 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 LY6G6DO95868 133 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 IGKV3-15P01624 115 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 FGF4P08620 206 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 KLK2P20151 261 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 ATP5C1P36542 298 aaKnown RBP2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 VDAC2P45880 294 aaPredicted RBP2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 NPBWR2P48146 333 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 RPS15P62841 145 aaKnown RBP2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 ORC2Q13416 577 aaPredicted RBP2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 CYTH1Q15438 398 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 NSDHLQ15738 373 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 KRTAP27-1Q3LI81 207 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 CCDC14Q49A88 953 aa2.88□□□□□ -1.95
RNU2-28P-201ENST00000410457 GPR157Q5UAW9 335 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms