RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 HIF3AQ9Y2N7 669 aa26.07■■□□□ 1.76
USP42-202ENST00000404008 E2F6O75461 281 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 RPL18Q07020 188 aaKnown RBP26.06■■□□□ 1.76
USP42-202ENST00000404008 FHL1Q13642 323 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 NUFIP2Q7Z417 695 aaKnown RBP26.06■■□□□ 1.76
USP42-202ENST00000404008 PXKQ7Z7A4 578 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 GALNT5Q7Z7M9 940 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 EPHX4Q8IUS5 362 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 SSC4DQ8WTU2 575 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 CA5BP1Q8WTZ4 195 aa26.06■■□□□ 1.76
USP42-202ENST00000404008 DOPEY1Q5JWR5 2465 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 CGAP01215 116 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 ZNF43P17038 809 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 AHCYP23526 432 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 NTF4P34130 210 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 ANKDD1AQ495B1 522 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 UEVLDQ8IX04 471 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 ZNF385AQ96PM9 386 aaKnown RBP26.05■■□□□ 1.76
USP42-202ENST00000404008 PIGMQ9H3S5 423 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 NOSIPQ9Y314 301 aaKnown RBP26.05■■□□□ 1.76
USP42-202ENST00000404008 NOX1Q9Y5S8 564 aa26.05■■□□□ 1.76
USP42-202ENST00000404008 COL12A1Q99715 3063 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 LRRK2Q5S007 2527 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 TRAV27A0A087WT01 109 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 C11orf98E9PRG8 122 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 RNF13O43567 381 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 TRAF3IP2O43734 574 aaPredicted RBP26.04■■□□□ 1.76
USP42-202ENST00000404008 CD8BP10966 210 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 HLA-DOBP13765 273 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 FPR3P25089 353 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 AQP2P41181 271 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 POU3F1Q03052 451 aaPredicted RBP26.04■■□□□ 1.76
USP42-202ENST00000404008 C1DQ13901 141 aaKnown RBP26.04■■□□□ 1.76
USP42-202ENST00000404008 SLC25A35Q3KQZ1 300 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 HMBOX1Q6NT76 420 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 NHLRC1Q6VVB1 395 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 OR51A7Q8NH64 312 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 MOSPD2Q8NHP6 518 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 GNPDA2Q8TDQ7 276 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 GIPC3Q8TF64 312 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 TMEM45BQ96B21 275 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 TNFRSF13CQ96RJ3 184 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 BDH2Q9BUT1 245 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 C12orf49Q9H741 205 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 S100A14Q9HCY8 104 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 PLSCR4Q9NRQ2 329 aa26.04■■□□□ 1.76
USP42-202ENST00000404008 ARRDC5A6NEK1 342 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 GSSP48637 474 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 ZBED5Q49AG3 693 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 SHQ1Q6PI26 577 aaKnown RBP26.03■■□□□ 1.76
USP42-202ENST00000404008 AMIGO2Q86SJ2 522 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 AQP11Q8NBQ7 271 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 ANKK1Q8NFD2 765 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 OR10G2Q8NGC3 310 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 JKAMPQ9P055 326 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 PROCRQ9UNN8 238 aa26.03■■□□□ 1.76
USP42-202ENST00000404008 FASNP49327 2511 aaKnown RBP26.02■■□□□ 1.76
USP42-202ENST00000404008 UNC119BA6NIH7 251 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 SMNDC1O75940 238 aaKnown RBP eCLIP26.02■■□□□ 1.761e-6■■■■□ 23.6
USP42-202ENST00000404008 CLDN14O95500 239 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 GASTP01350 101 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 TSPAN31Q12999 210 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 NRBF2Q96F24 287 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 UCK2Q9BZX2 261 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 MCCC2Q9HCC0 563 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 PDP1Q9P0J1 537 aaPredicted RBP26.02■■□□□ 1.76
USP42-202ENST00000404008 SIGLEC7Q9Y286 467 aa26.02■■□□□ 1.76
USP42-202ENST00000404008 FAM90A27PA6NNH2 459 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 EEF1E1-BLOC1S5C9J1V9 151 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 EEF1E1O43324 174 aaKnown RBP26.01■■□□□ 1.75
USP42-202ENST00000404008 PTP4A3O75365 173 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 HS3ST5Q8IZT8 346 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 STMN2Q93045 179 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 DGCR6LQ9BY27 220 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 OPN3Q9H1Y3 402 aaPredicted RBP26.01■■□□□ 1.75
USP42-202ENST00000404008 PARPBPQ9NWS1 579 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 MGAT4BQ9UQ53 548 aa26.01■■□□□ 1.75
USP42-202ENST00000404008 UTP20O75691 2785 aaKnown RBP26.01■■□□□ 1.75
USP42-202ENST00000404008 MSTNO14793 375 aa26■■□□□ 1.75
USP42-202ENST00000404008 MRPL33O75394 65 aaKnown RBP26■■□□□ 1.75
USP42-202ENST00000404008 SERPINI2O75830 405 aa26■■□□□ 1.75
USP42-202ENST00000404008 F13BP05160 661 aa26■■□□□ 1.75
USP42-202ENST00000404008 ZNF26P17031 533 aaPredicted RBP26■■□□□ 1.75
USP42-202ENST00000404008 EDNRAP25101 427 aa26■■□□□ 1.75
USP42-202ENST00000404008 OR3A2P47893 321 aa26■■□□□ 1.75
USP42-202ENST00000404008 ARHGDIAP52565 204 aa26■■□□□ 1.75
USP42-202ENST00000404008 CLDN17P56750 224 aa26■■□□□ 1.75
USP42-202ENST00000404008 ALG10Q5BKT4 473 aa26■■□□□ 1.75
USP42-202ENST00000404008 CASP12Q6UXS9 341 aa26■■□□□ 1.75
USP42-202ENST00000404008 TFAP2EQ6VUC0 442 aa26■■□□□ 1.75
USP42-202ENST00000404008 ZNF771Q7L3S4 317 aaPredicted RBP26■■□□□ 1.75
USP42-202ENST00000404008 OR5K1Q8NHB7 308 aa26■■□□□ 1.75
USP42-202ENST00000404008 CENPNQ96H22 339 aaPredicted RBP26■■□□□ 1.75
USP42-202ENST00000404008 FEVQ99581 238 aa26■■□□□ 1.75
USP42-202ENST00000404008 PKP2Q99959 881 aa26■■□□□ 1.75
USP42-202ENST00000404008 CACNA1CQ13936 2221 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 FREM1Q5H8C1 2179 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 POU2F1P14859 743 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 PRPS1P60891 318 aa25.99■■□□□ 1.75
USP42-202ENST00000404008 AAED1Q7RTV5 226 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms