RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 FAM20BO75063 409 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 OR7A10O76100 309 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 PLA2G5P39877 138 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 TPTEP56180 551 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CXADRP78310 365 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 TLE3Q04726 772 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 ZBED5Q49AG3 693 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CCDC58Q4VC31 144 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 SYT14P1Q58G82 188 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 SLC27A4Q6P1M0 643 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 C3P1Q6ZMU1 363 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 RFLNBQ8N5W9 214 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 TMEM251Q8N6I4 163 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 FADS6Q8N9I5 356 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 TUBA1CQ9BQE3 449 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 IL20Q9NYY1 176 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 CLEC2DQ9UHP7 191 aa10.51□□□□□ -0.73
SKA3-203ENST00000400018 A0A0J9YW62 118 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 BHLHE40O14503 412 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 EIF1AYO14602 144 aaKnown RBP10.5□□□□□ -0.73
SKA3-203ENST00000400018 RNF13O43567 381 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 FADS2O95864 444 aaKnown RBP10.5□□□□□ -0.73
SKA3-203ENST00000400018 BGLAPP02818 100 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 SP1P08047 785 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 GABRB1P18505 474 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 PYCR1P32322 319 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 HSPA13P48723 471 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 SOX8P57073 446 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 CDK5Q00535 292 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 FOXK2Q01167 660 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 SELENBP1Q13228 472 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 ZNF766Q5HY98 468 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 CASP12Q6UXS9 341 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 RASSF6Q6ZTQ3 369 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 GPR141Q7Z602 305 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 OR4F15Q8NGB8 312 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 ABHD17AQ96GS6 310 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 SRXN1Q9BYN0 137 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 MARCH7Q9H992 704 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 SRA1Q9HD15 236 aaKnown RBP10.5□□□□□ -0.73
SKA3-203ENST00000400018 ZNF891A8MT65 544 aaPredicted RBP10.5□□□□□ -0.73
SKA3-203ENST00000400018 H0YAE9 185 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 BMP7P18075 431 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 CRHBPP24387 322 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 EDNRAP25101 427 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 CDKN2AP42771 156 aaKnown RBP10.5□□□□□ -0.73
SKA3-203ENST00000400018 OR2B6P58173 313 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 FMODQ06828 376 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 GTF3C1Q12789 2109 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 PGGHGQ32M88 737 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 TMPRSS11FQ6ZWK6 438 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 RHOXF1Q8NHV9 184 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 PMM1Q92871 262 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 PTP4A1Q93096 173 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 PTGES2Q9H7Z7 377 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 PNPLA3Q9NST1 481 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 CDH10Q9Y6N8 788 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 USP24Q9UPU5 2620 aa10.5□□□□□ -0.73
SKA3-203ENST00000400018 IGHV3-9P01782 118 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 PNMTP11086 282 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SLC6A8P48029 635 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TUBA4AP68366 448 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 RFX4Q33E94 735 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SLX4IPQ5VYV7 408 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 PLEKHG7Q6ZR37 379 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ZNF440Q8IYI8 595 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 FAM98AQ8NCA5 519 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 THAP4Q8WY91 577 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 FAM122AQ96E09 287 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SGCZQ96LD1 299 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SFXN2Q96NB2 322 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 PITX2Q99697 317 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CFAP46Q8IYW2 2715 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 IGKV1D-43A0A0B4J1Z2 117 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 OR6C68A6NDL8 312 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 A8MVM7 634 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 H0YJX3 145 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 H3BSH0 61 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SURF4O15260 269 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TMCC2O75069 709 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 NPIPB7O75200 414 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 MT-ND2P03891 347 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CYC1P08574 325 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ASAH2BP0C7U1 165 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 EIF1AXP47813 144 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 DIO1P49895 249 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TNFSF10P50591 281 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 CTBP2P56545 445 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 RPS7P62081 194 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 ESRRGP62508 458 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 PPIAP62937 165 aaKnown RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 POU3F1Q03052 451 aaPredicted RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 PRR30Q53SZ7 412 aaPredicted RBP10.49□□□□□ -0.73
SKA3-203ENST00000400018 ALG10Q5BKT4 473 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 SLC25A25Q6KCM7 469 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 C19orf48Q6RUI8 117 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 TRILQ7L0X0 811 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 MDS2Q8NDY4 140 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 GGHQ92820 318 aa10.49□□□□□ -0.73
SKA3-203ENST00000400018 ZMYND19Q96E35 227 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms