RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CAPN7Q9Y6W3 813 aa13.02□□□□□ -0.33
SMIM11A-203ENST00000399299 ARPC4-TTLL3A0A0A6YYG9 625 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 UPK3AO75631 287 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 MT-ATP6P00846 226 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 CD8AP01732 235 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 HOXB1P14653 301 aaPredicted RBP13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 NQO1P15559 274 aaKnown RBP13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 CRYBA2P53672 197 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 LTBQ06643 244 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 LGALS3BPQ08380 585 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 SPOCK1Q08629 439 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 TBRG1Q3YBR2 411 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 HIKESHIQ53FT3 197 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 ENTPD8Q5MY95 495 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 AGAP6Q5VW22 663 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 HMBOX1Q6NT76 420 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 LINGO2Q7L985 606 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 SNX32Q86XE0 403 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 DEPDC4Q8N2C3 294 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 PIK3C3Q8NEB9 887 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 ADAMTS16Q8TE57 1224 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 DHRS9Q9BPW9 319 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 ASPNQ9BXN1 380 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 ALG2Q9H553 416 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 POU2F3Q9UKI9 436 aa13.01□□□□□ -0.33
SMIM11A-203ENST00000399299 TRAPPC13A5PLN9 417 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 E7EQL1 145 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 MS4A18H0YCH9 400 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 H7C1Q1 480 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 LYPD3O95274 346 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 HPRP00739 348 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
SMIM11A-203ENST00000399299 CBLP22681 906 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 TTKP33981 857 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 MDH1P40925 334 aaKnown RBP13□□□□□ -0.33
SMIM11A-203ENST00000399299 ROR2Q01974 943 aaKnown RBP13□□□□□ -0.33
SMIM11A-203ENST00000399299 PUDPQ08623 228 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 MS4A18Q3C1V0 323 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 C3orf36Q3SXR2 165 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF544Q6NX49 715 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 ANKRD16Q6P6B7 361 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 UEVLDQ8IX04 471 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 TMEM123Q8N131 208 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 GPR137CQ8N3F9 429 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 OR4D11Q8NGI4 311 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 C10orf82Q8WW14 230 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 BCL2L2Q92843 193 aaPredicted RBP13□□□□□ -0.33
SMIM11A-203ENST00000399299 MPP4Q96JB8 637 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 MOGAT1Q96PD6 335 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 OR2M2Q96R28 347 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF426Q9BUY5 554 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 NELFAQ9H3P2 528 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 FKRPQ9H9S5 495 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 NOX1Q9Y5S8 564 aa13□□□□□ -0.33
SMIM11A-203ENST00000399299 TRIM64A6NGJ6 449 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 TRIM64BA6NI03 449 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 CPSF4LA6NMK7 179 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 ATP8B1O43520 1251 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 THY1P04216 161 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 CDKN1AP38936 164 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 UBE2NP61088 152 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 IL1RL1Q01638 556 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 PMS2P3Q13401 168 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 C11orf71Q6IPW1 123 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 CLEC9AQ6UXN8 241 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 NHLRC1Q6VVB1 395 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 B3GLCTQ6Y288 498 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 TSPYL5Q86VY4 417 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 RBM45Q8IUH3 476 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 CIARTQ8N365 385 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 FAM169BQ8N8A8 192 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 OR5J2Q8NH18 312 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 PROX1Q92786 737 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 LRR1Q96L50 414 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 ZNF583Q96ND8 569 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 SMR3AQ99954 134 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 POLR2J2Q9GZM3 115 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 POLR2J3Q9H1A7 115 aaKnown RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 BARX1Q9HBU1 254 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 CBLN4Q9NTU7 201 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 CRNNQ9UBG3 495 aaPredicted RBP12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 BAG5Q9UL15 447 aa12.99□□□□□ -0.33
SMIM11A-203ENST00000399299 ALPK2Q86TB3 2170 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 LOC100653049A0A140TA62 436 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 FAM220BPB1ANY3 271 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 LRRN3E7EW58 273 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 PLPP3O14495 311 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 KRT34O76011 436 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 IFNA14P01570 189 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 HEXAP06865 529 aa12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
SMIM11A-203ENST00000399299 KRTAP21-3Q3LHN1 58 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms