RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 EPS15L1Q9UBC2 864 aa2.4□□□□□ -2.03
CMC1-202ENST00000396610 SNX6Q9UNH7 406 aa2.4□□□□□ -2.03
CMC1-202ENST00000396610 KCNIP3Q9Y2W7 256 aa2.4□□□□□ -2.03
CMC1-202ENST00000396610 NDC80O14777 642 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 CD5LO43866 347 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 IGLV2-23P01705 113 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 MNAT1P51948 309 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 PDIA2Q13087 525 aaKnown RBP2.39□□□□□ -2.03
CMC1-202ENST00000396610 OR5I1Q13606 314 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 DPYSL2Q16555 572 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 SGCAQ16586 387 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 TMEM183BQ1AE95 376 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 DEFB116Q30KQ4 102 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 SFT2D3Q587I9 215 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 PDZK1Q5T2W1 519 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 LCN12Q6JVE5 192 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 GET4Q7L5D6 327 aaPredicted RBP2.39□□□□□ -2.03
CMC1-202ENST00000396610 VSTM4Q8IW00 320 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 TMEM183AQ8IXX5 376 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 CYB561D1Q8N8Q1 229 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 OR10G2Q8NGC3 310 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 MCOLN3Q8TDD5 553 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 RLN3Q8WXF3 142 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 FGF14Q92915 247 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 CXorf40BQ96DE9 158 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 FOPNLQ96NB1 174 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 MTMR9Q96QG7 549 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 RIOK2Q9BVS4 552 aaKnown RBP2.39□□□□□ -2.03
CMC1-202ENST00000396610 CAPS2Q9BXY5 557 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 RANBP3Q9H6Z4 567 aaPredicted RBP2.39□□□□□ -2.03
CMC1-202ENST00000396610 SLCO1B3Q9NPD5 702 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 LHX9Q9NQ69 397 aa2.39□□□□□ -2.03
CMC1-202ENST00000396610 ZNF282Q9UDV7 671 aaPredicted RBP2.39□□□□□ -2.03
CMC1-202ENST00000396610 MED6O75586 246 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 HPGDP15428 266 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 ZNF823P16415 610 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 TBPP20226 339 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 CCR1P32246 355 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 DUSP3P51452 185 aaPredicted RBP2.38□□□□□ -2.03
CMC1-202ENST00000396610 ZNF136P52737 540 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 FGF8P55075 233 aaPredicted RBP2.38□□□□□ -2.03
CMC1-202ENST00000396610 SMARCB1Q12824 385 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 GUCA2BQ16661 112 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 KLHL38Q2WGJ6 581 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 THOC6Q86W42 341 aaKnown RBP2.38□□□□□ -2.03
CMC1-202ENST00000396610 ECHDC2Q86YB7 292 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 TEX9Q8N6V9 391 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 FNDC5Q8NAU1 212 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 UBE2Q2Q8WVN8 375 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 LRRC58Q96CX6 371 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 TSGA13Q96PP4 275 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 ERP44Q9BS26 406 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 GLRX2Q9NS18 164 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 CALYQ9NYX4 217 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 BFARQ9NZS9 450 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 PCYOX1Q9UHG3 505 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 MRPS7Q9Y2R9 242 aaKnown RBP2.38□□□□□ -2.03
CMC1-202ENST00000396610 ATP6V0A2Q9Y487 856 aa2.38□□□□□ -2.03
CMC1-202ENST00000396610 IGLV4-60A0A075B6I1 120 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 IGLV3-22A0A075B6J6 115 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 IGKV6-21A0A0C4DH24 114 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 OR5B21A6NL26 309 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 PEX7O00628 323 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 SLC31A2O15432 143 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 AIREO43918 545 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 GMFGO60234 142 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 SPAG7O75391 227 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 SCGNO76038 276 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 RETP07949 1114 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 GKN3PP0CG01 181 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 NCK1P16333 377 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 ZNF30P17039 623 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 PMELP40967 661 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 ATP1B3P54709 279 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 CDK16Q00536 496 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 FAM83EQ2M2I3 478 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 OR4F3Q6IEY1 312 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 LRRC31Q6UY01 552 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 ABHD12BQ7Z5M8 362 aaPredicted RBP2.37□□□□□ -2.03
CMC1-202ENST00000396610 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 PIANPQ8IYJ0 282 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 ZNF561Q8N587 486 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 FAM133AQ8N9E0 248 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 GMCL1P1Q8NEA9 526 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 OR1N2Q8NGR9 330 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 OR2G3Q8NGZ4 309 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 DNAJC19Q96DA6 116 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 TSNARE1Q96NA8 513 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 GBA3Q9H227 469 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 LY9Q9HBG7 655 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 SPATA7Q9P0W8 599 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
CMC1-202ENST00000396610 PTBP2Q9UKA9 531 aaKnown RBP2.37□□□□□ -2.03
CMC1-202ENST00000396610 DDX49Q9Y6V7 483 aaKnown RBP2.37□□□□□ -2.03
CMC1-202ENST00000396610 RPAP1Q9BWH6 1393 aaPredicted RBP2.36□□□□□ -2.03
CMC1-202ENST00000396610 IGLV11-55A0A075B6I3 123 aa2.36□□□□□ -2.03
CMC1-202ENST00000396610 PPIAL4EA0A075B759 164 aa2.36□□□□□ -2.03
CMC1-202ENST00000396610 A0A1W2PQ67 120 aa2.36□□□□□ -2.03
CMC1-202ENST00000396610 MAGEB3O15480 346 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms