RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 CTHRC1Q96CG8 243 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
TRIM40-207ENST00000396581 MRGPRX1Q96LB2 322 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 CXorf58Q96LI9 332 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 C1QTNF6Q9BXI9 259 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 LYRM4Q9HD34 91 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 TMEM74BQ9NUR3 256 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 ZNF69Q9UC07 566 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 OPN4Q9UHM6 478 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 A0A1W2PQU0 124 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 SLC22A23A1A5C7 686 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 ACOD1A6NK06 481 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 ARPC3O15145 178 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 P2RX6O15547 441 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 B3GALT2O43825 422 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 NKX2-2O95096 273 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 GABRA1P14867 456 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 PSMB10P40306 273 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 DLX5P56178 289 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 NANOS3P60323 173 aaKnown RBP12.18□□□□□ -0.46
TRIM40-207ENST00000396581 ZNF273Q14593 569 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 FIGNL1Q6PIW4 674 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 HSD17B13Q7Z5P4 300 aaPredicted RBP12.18□□□□□ -0.46
TRIM40-207ENST00000396581 ZAR1Q86SH2 424 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 ZBTB44Q8NCP5 570 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 C7orf57Q8NEG2 295 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 GRHL3Q8TE85 626 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 PIGKQ92643 395 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 TRIM2Q9C040 744 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 LDAHQ9H6V9 325 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
TRIM40-207ENST00000396581 IER3IP1Q9Y5U9 82 aa12.18□□□□□ -0.46
TRIM40-207ENST00000396581 MCIDASD6RGH6 385 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TNFSF14O43557 240 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 RP2O75695 350 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SERPINI2O75830 405 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 ZFPL1O95159 310 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 PPP3CBP16298 524 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 POU3F2P20265 443 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 CDK2P24941 298 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TAS2R20P59543 309 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 RPS15P62841 145 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 CBFBQ13951 182 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SMAD2Q15796 467 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 DEFB134Q4QY38 66 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 ALG10BQ5I7T1 473 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 DPY19L2P2Q6ZN68 376 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SERPINA12Q8IW75 414 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 ASB12Q8WXK4 309 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 FAM3CQ92520 227 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 ORAI1Q96D31 301 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 WDR89Q96FK6 387 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SMAD5Q99717 465 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SLC25A18Q9H1K4 315 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SLC2A4RGQ9NR83 387 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 DNAJB12Q9NXW2 375 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 COLEC10Q9Y6Z7 277 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TBC1D3DA0A087WVF3 549 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TBC1D3IA0A087WXS9 549 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TBC1D3LB9A6J9 549 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TOR1AO14656 332 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TSPAN4O14817 238 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SELENOFO60613 162 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 GLSO94925 669 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 LPLP06858 475 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TBC1D3HP0C7X1 549 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 VSIG10L2P0DP72 767 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SPI1P17947 270 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 CSRP1P21291 193 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 GABRA3P34903 492 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 ART1P52961 327 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SFRP5Q5T4F7 317 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 SLC6A19Q695T7 634 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TBC1D3CQ6IPX1 549 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 STAC2Q6ZMT1 411 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 DND1Q8IYX4 353 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TBC1D3Q8IZP1 549 aaPredicted RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 BVESQ8NE79 360 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 OR51L1Q8NGJ5 315 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 C1orf216Q8TAB5 229 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 RBM18Q96H35 190 aaKnown RBP12.17□□□□□ -0.46
TRIM40-207ENST00000396581 PTCHD1Q96NR3 888 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TRIOO75962 3097 aa12.17□□□□□ -0.46
TRIM40-207ENST00000396581 TRBV5-5A0A0J9YX44 114 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 URADA6NGE7 173 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 PRR32B1ATL7 298 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 PYCARD-AS1I3L0S3 204 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 SOX1O00570 391 aaPredicted RBP12.16□□□□□ -0.46
TRIM40-207ENST00000396581 FGF17O60258 216 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 TSPAN9O75954 239 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 AQP8O94778 261 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 WDPCPO95876 746 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 SRFP11831 508 aa12.16□□□□□ -0.46
TRIM40-207ENST00000396581 CFPP27918 469 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms