RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 RNF44Q7L0R7 432 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 FAM98AQ8NCA5 519 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 BBS1Q8NFJ9 593 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR51L1Q8NGJ5 315 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR51S1Q8NGJ8 323 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 EDARADDQ8WWZ3 215 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 CDC6Q99741 560 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 DERL2Q9GZP9 239 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 IL21RQ9HBE5 538 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 C14orf166Q9Y224 244 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 PIKFYVEQ9Y2I7 2098 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR6C76A6NM76 312 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 RNASEK-C17orf49H0YIS7 233 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 CASC3O15234 703 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR1D2P34982 312 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 CRYBB2P43320 205 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 TRA2AQ13595 282 aaKnown RBP eCLIP7.79□□□□□ -1.16
NDE1-202ENST00000396355 RPE65Q16518 533 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 GLYR1Q49A26 553 aaPredicted RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 LRIF1Q5T3J3 769 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 FCRLAQ7L513 359 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 CD163Q86VB7 1156 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 C17orf78Q8N4C9 275 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 Q8NFD4 153 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 MDGA1Q8NFP4 955 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR52L1Q8NGH7 329 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR52I2Q8NH67 350 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 AARSD1Q9BTE6 412 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 MENTQ9BUN1 341 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 DDA1Q9BW61 102 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR11A1Q9GZK7 315 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 CST11Q9H112 138 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 HIPK2Q9H2X6 1198 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 GPR34Q9UPC5 381 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 F5P12259 2224 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 XIRP2A4UGR9 3374 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 TRAV18A0A075B6X5 111 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 A0A0A6YYH2 397 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 UNC119BA6NIH7 251 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 A6NJ64 397 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 BCHEP06276 602 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 CST2P09228 141 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PRR35P0CG20 571 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PKMP14618 531 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 ZNF20P17024 532 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 DGKGP49619 791 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 REEP5Q00765 189 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 SQSTM1Q13501 440 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 SLC9A3R2Q15599 337 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 XKR6Q5GH73 641 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 THEM4Q5T1C6 240 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 IRAK1BP1Q5VVH5 260 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 ACSM5Q6NUN0 579 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 MCEMP1Q8IX19 187 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PIANPQ8IYJ0 282 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 OR6V1Q8N148 313 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 COMMD1Q8N668 190 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 ZNF610Q8N9Z0 462 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PLA2G15Q8NCC3 412 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 GPR150Q8NGU9 434 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 GNPDA2Q8TDQ7 276 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 SMPDL3BQ92485 455 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 LIN37Q96GY3 246 aaPredicted RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 CASD1Q96PB1 797 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 EPYCQ99645 322 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 PATZ1Q9HBE1 687 aaKnown RBP7.79□□□□□ -1.16
NDE1-202ENST00000396355 SERINC1Q9NRX5 453 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 C19orf12Q9NSK7 152 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 FBXL4Q9UKA2 621 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 HCFC2Q9Y5Z7 792 aa7.79□□□□□ -1.16
NDE1-202ENST00000396355 DRGXA6NNA5 263 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 PRAMEF11O60813 436 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 KERAO60938 352 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 RPP40O75818 363 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 HLA-AP01891 365 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 IFNGR2P38484 337 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 CCR4P51679 360 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ZNF140P52738 457 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 CACNG1Q06432 222 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 IL10RBQ08334 325 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 PIN1Q13526 163 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 GPNMBQ14956 572 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 AWAT1Q58HT5 328 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 C3orf38Q5JPI3 329 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 KLHL24Q6TFL4 600 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 TRIM46Q7Z4K8 759 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 OAFQ86UD1 273 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 FBXO15Q8NCQ5 510 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 RHEBL1Q8TAI7 183 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 APH1BQ8WW43 257 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 GEMIN6Q8WXD5 167 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 FUBP1Q96AE4 644 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 ORAI1Q96D31 301 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 CDKN2AIPNLQ96HQ2 116 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 AP1S3Q96PC3 154 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NKX3-1Q99801 234 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 KXD1Q9BQD3 176 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NDC1Q9BTX1 674 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 GPR55Q9Y2T6 319 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 IRGMA1A4Y4 181 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms