RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.83■□□□□ 0.44
RCCD1-201ENST00000394258 ZNF576Q9H609 170 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 C12orf4Q9NQ89 552 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 ANKRD61A6NGH8 418 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 SERPINA3P01011 423 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 PDGFAP04085 211 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 CD38P28907 300 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 CLDN12P56749 244 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 CTXN1P60606 82 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 STPG1Q5TH74 334 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 ZNF767PQ75MW2 155 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 SYS1Q8N2H4 156 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 GFI1Q99684 422 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 CDCP1Q9H5V8 836 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 LMAN1LQ9HAT1 526 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 UBQLN4Q9NRR5 601 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 PRODH2Q9UF12 536 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 NPFFR2Q9Y5X5 522 aa17.83■□□□□ 0.44
RCCD1-201ENST00000394258 DCTN6O00399 190 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 SCDO00767 359 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 PIN1P1O15428 100 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 ARL6IP5O75915 188 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 MST1P26927 711 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 PTGS2P35354 604 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 NANOS3P60323 173 aaKnown RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 BTG1P62324 171 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 WBP2NLQ6ICG8 309 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 RPL22L1Q6P5R6 122 aaKnown RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 SERPINA12Q8IW75 414 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 ZNF563Q8TA94 476 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 TTC9Q92623 222 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 ELF4Q99607 663 aaPredicted RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 GTPBP2Q9BX10 602 aaKnown RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 GHITMQ9H3K2 345 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 ANKRD10Q9NXR5 420 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 SLCO1C1Q9NYB5 712 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 SHOXO15266 292 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 UTS2O95399 124 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 AP2S1P53680 142 aaPredicted RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 SLC37A1P57057 533 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 GGTLC2Q14390 218 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 HSD17B12Q53GQ0 312 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 BICRALQ6AI39 1079 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 JAZF1Q86VZ6 243 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 GKN2Q86XP6 184 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 TMEM151BQ8IW70 566 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 ZNF687Q8N1G0 1237 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 TEX19Q8NA77 164 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 LSM14AQ8ND56 463 aaKnown RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 PMEPA1Q969W9 287 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 KTI12Q96EK9 354 aaPredicted RBP17.82■□□□□ 0.44
RCCD1-201ENST00000394258 DPAGT1Q9H3H5 408 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 GMEB2Q9UKD1 530 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 CA14Q9ULX7 337 aa17.82■□□□□ 0.44
RCCD1-201ENST00000394258 TRAV1-2A0A0B4J238 106 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 TMEM72A0PK05 275 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 TVP23AA6NH52 213 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 KHNYNO15037 678 aaKnown RBP17.81■□□□□ 0.44
RCCD1-201ENST00000394258 ARPC3O15145 178 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 GUSBP08236 651 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 UCHL1P09936 223 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 OR8G3PP0DMU2 310 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 NME1P15531 152 aaKnown RBP17.81■□□□□ 0.44
RCCD1-201ENST00000394258 ATF4P18848 351 aaPredicted RBP17.81■□□□□ 0.44
RCCD1-201ENST00000394258 M6PRP20645 277 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 PRPS1P60891 318 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 RPS4XP62701 263 aaKnown RBP17.81■□□□□ 0.44
RCCD1-201ENST00000394258 EGR4Q05215 589 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 LTBQ06643 244 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 ZNF74Q16587 644 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 ALG10Q5BKT4 473 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 SYT13Q7L8C5 426 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 SCMH1Q96GD3 660 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 CACNG6Q9BXT2 260 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 TSPAN10Q9H1Z9 355 aaPredicted RBP17.81■□□□□ 0.44
RCCD1-201ENST00000394258 SYNDIG1Q9H7V2 258 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 NUDT1P36639 197 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 SKP2Q13309 424 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 LINC01590Q5TEZ4 76 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 ATG4DQ86TL0 474 aaPredicted RBP17.81■□□□□ 0.44
RCCD1-201ENST00000394258 CMTM4Q8IZR5 234 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 SLC43A2Q8N370 569 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 C9orf62Q8N4C0 152 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 HAVCR2Q8TDQ0 301 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 NMNAT2Q9BZQ4 307 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 KLHDC2Q9Y2U9 406 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 PCNX3Q9H6A9 2034 aa17.81■□□□□ 0.44
RCCD1-201ENST00000394258 A0A1B0GTH9 108 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 ZFPL1O95159 310 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 UBL3O95164 117 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 GPANK1O95872 356 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 DHFRP00374 187 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 PTHLHP12272 177 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 MYF5P13349 255 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 SRMP19623 302 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 ZNF527Q8NB42 609 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 FKRPQ9H9S5 495 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 LANCL2Q9NS86 450 aa17.8■□□□□ 0.44
RCCD1-201ENST00000394258 RXFP3Q9NSD7 469 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms