RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 MSTNO14793 375 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 RNF13O43567 381 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 MRPL33O75394 65 aaKnown RBP13.24□□□□□ -0.29
SUMO1-203ENST00000392246 E2F6O75461 281 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 SMNDC1O75940 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
SUMO1-203ENST00000392246 HPRP00739 348 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 CGAP01215 116 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 TSPAN19P0C672 248 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 RNF224P0DH78 156 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 ARHGDIAP52565 204 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 RPL18Q07020 188 aaKnown RBP13.24□□□□□ -0.29
SUMO1-203ENST00000392246 CDSNQ15517 529 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 ATP6AP1Q15904 470 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 C1orf94Q6P1W5 598 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 ZIC4Q8N9L1 334 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 TMEM45BQ96B21 275 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 BDH2Q9BUT1 245 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 UCK2Q9BZX2 261 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 JKAMPQ9P055 326 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 HIF3AQ9Y2N7 669 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 FREM1Q5H8C1 2179 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 CACNA1CQ13936 2221 aa13.24□□□□□ -0.29
SUMO1-203ENST00000392246 EEF1E1-BLOC1S5C9J1V9 151 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 EEF1E1O43324 174 aaKnown RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 KLF4O43474 513 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ENTPD5O75356 428 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 UQCRC1P31930 480 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 AQP2P41181 271 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 IST1P53990 364 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 PRPS1P60891 318 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 RPS4XP62701 263 aaKnown RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 LAPTM4AQ15012 233 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ZBED5Q49AG3 693 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ZNF770Q6IQ21 691 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 STK32CQ86UX6 486 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ZNF100Q8IYN0 542 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 OR9Q2Q8NGE9 314 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 OR13C2Q8NGS9 318 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 OR51A7Q8NH64 312 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 GIPC3Q8TF64 312 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ZNF385AQ96PM9 386 aaKnown RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 TRAV27A0A087WT01 109 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 UNC119BA6NIH7 251 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 A8MXE2 369 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 TRAF3IP2O43734 574 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 FPR3P25089 353 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 NTF4P34130 210 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 OR3A2P47893 321 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ASCL1P50553 236 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 CLDN17P56750 224 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 POU3F1Q03052 451 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 TAF11Q15544 211 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 TFAP2EQ6VUC0 442 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 NHLRC1Q6VVB1 395 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 AAED1Q7RTV5 226 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 TMEM179BQ7Z7N9 219 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ZNF610Q8N9Z0 462 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 AQP11Q8NBQ7 271 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 OR10G2Q8NGC3 310 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 MOSPD2Q8NHP6 518 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 LRTOMTQ8WZ04 291 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 APH1AQ96BI3 265 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 LRRC46Q96FV0 321 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 GPA33Q99795 319 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 OPN3Q9H1Y3 402 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 INIPQ9NRY2 104 aa13.23□□□□□ -0.29
SUMO1-203ENST00000392246 PDP1Q9P0J1 537 aaPredicted RBP13.23□□□□□ -0.29
SUMO1-203ENST00000392246 ALPK2Q86TB3 2170 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 USP9XQ93008 2570 aaPredicted RBP13.22□□□□□ -0.29
SUMO1-203ENST00000392246 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 H3BNX3 289 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
SUMO1-203ENST00000392246 PTP4A3O75365 173 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 SERPINI2O75830 405 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 GASTP01350 101 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 GSSP48637 474 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 TSPAN31Q12999 210 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 FHL1Q13642 323 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 ALG10Q5BKT4 473 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 SHQ1Q6PI26 577 aaKnown RBP13.22□□□□□ -0.29
SUMO1-203ENST00000392246 CASP12Q6UXS9 341 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 BEND4Q6ZU67 534 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 CENPNQ96H22 339 aaPredicted RBP13.22□□□□□ -0.29
SUMO1-203ENST00000392246 NDEL1Q9GZM8 345 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 S100A14Q9HCY8 104 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 MGAT4BQ9UQ53 548 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 RCE1Q9Y256 329 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 SIGLEC7Q9Y286 467 aa13.22□□□□□ -0.29
SUMO1-203ENST00000392246 HCFC1P51610 2035 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms