RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 FAM231BA6NCW3 169 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 IGLV1-47P01700 117 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 GAPDHP04406 335 aaKnown RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 FGF1P05230 155 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 GIPP09681 153 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 UBTFL1P0CB47 393 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 HPGDP15428 266 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 TCN1P20061 433 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 FUT3P21217 361 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 HTR1EP28566 365 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 ATP5C1P36542 298 aaKnown RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 RCN1Q15293 331 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 ZNF620Q6ZNG0 422 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 CCDC73Q6ZRK6 1079 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 C19orf35Q6ZS72 473 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 PNKDQ8N490 385 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 OR2G2Q8NGZ5 317 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 FRAT1Q92837 279 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 TSNARE1Q96NA8 513 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 ZIM3Q96PE6 472 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 OR8B4Q96RC9 309 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 PLEKHF1Q96S99 279 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 KCTD14Q9BQ13 255 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 CENPKQ9BS16 269 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 ILKAPQ9H0C8 392 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 VPS37BQ9H9H4 285 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 NANOGQ9H9S0 305 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 PDFQ9HBH1 243 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 PLSCR3Q9NRY6 295 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 MTRF1LQ9UGC7 380 aaKnown RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 ZNF256Q9Y2P7 627 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 SLC25A15Q9Y619 301 aa3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 ZNF646O15015 1829 aaPredicted RBP3.83□□□□□ -1.8
RNU6-40P-201ENST00000384254 RLFQ13129 1914 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 C12orf71A8MTZ7 269 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 UPK3AO75631 287 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 AGTP01019 485 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ICAM2P13598 275 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 KITLGP21583 273 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 RORAP35398 523 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 VHLP40337 213 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 WNT4P56705 351 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 NDPQ00604 133 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ZNF763Q0D2J5 394 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 CUL2Q13617 745 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ARHGAP19Q14CB8 494 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 CCDC14Q49A88 953 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 HSP90AB3PQ58FF7 597 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 TRIM40Q6P9F5 258 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 BBS5Q8N3I7 341 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 OR2L3Q8NG85 312 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ACOT11Q8WXI4 607 aaPredicted RBP3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ARPC1AQ92747 370 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 SMARCD2Q92925 531 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ASB8Q9H765 288 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ADAP2Q9NPF8 381 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 EXD2Q9NVH0 621 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 PISDQ9UG56 409 aa3.82□□□□□ -1.8
RNU6-40P-201ENST00000384254 ARHGAP23Q9P227 1491 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 PSMB11A5LHX3 300 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 TRIM49D1C9J1S8 452 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 GOSR2O14653 212 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 RNF13O43567 381 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 CST1P01037 141 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 TOP1P11387 765 aaKnown RBP3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 HNRNPH3P31942 346 aaKnown RBP3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 PRMT2P55345 433 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 SH3BGRP55822 239 aaPredicted RBP3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 ACVR1Q04771 509 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 ENPEPQ07075 957 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 PDIA2Q13087 525 aaKnown RBP3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 VPS26BQ4G0F5 336 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 CASC10Q5T4H9 136 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 RAET1LQ5VY80 246 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 C11orf53Q8IXP5 236 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 RAB3IL1Q8TBN0 382 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 RPUSD4Q96CM3 377 aaKnown RBP3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 FCRL1Q96LA6 429 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 MS4A4EQ96PG1 132 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 RASL11BQ9BPW5 248 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 TMEM246Q9BRR3 403 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 RIOK2Q9BVS4 552 aaKnown RBP3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 GPR61Q9BZJ8 451 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 LY9Q9HBG7 655 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 STARD10Q9Y365 291 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 NEUROG3Q9Y4Z2 214 aa3.81□□□□□ -1.8
RNU6-40P-201ENST00000384254 A0A1W2PPV9 198 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 USP27XA6NNY8 438 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 C12orf77C9JDV5 145 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 CCL21O00585 134 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 ZNF19P17023 458 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 UGT2B15P54855 530 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 NUP107P57740 925 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 FBXW4P57775 412 aa3.8□□□□□ -1.8
RNU6-40P-201ENST00000384254 BEX3Q00994 111 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms