RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ANKRD61A6NGH8 418 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 TMEM127O75204 238 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 RPS5P46782 204 aaKnown RBP20.96■□□□□ 0.95
VPS16-201ENST00000380443 GDI2P50395 445 aaKnown RBP20.96■□□□□ 0.95
VPS16-201ENST00000380443 INSL4Q14641 139 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 BAK1Q16611 211 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 PYDC2Q56P42 97 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 SHISA6Q6ZSJ9 500 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 LSRQ86X29 649 aaPredicted RBP20.96■□□□□ 0.95
VPS16-201ENST00000380443 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.96■□□□□ 0.95
VPS16-201ENST00000380443 PPP1R3EQ9H7J1 279 aa20.96■□□□□ 0.95
VPS16-201ENST00000380443 RPRD1BQ9NQG5 326 aaKnown RBP20.96■□□□□ 0.95
VPS16-201ENST00000380443 ANKUB1A6NFN9 424 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 SCO2O43819 266 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 SUSD5O60279 629 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 TIAF1O95411 115 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 CFIP05156 583 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 SHC1P29353 583 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 ACVR1BP36896 505 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 TOMM34Q15785 309 aaPredicted RBP20.95■□□□□ 0.94
VPS16-201ENST00000380443 ZMAT1Q5H9K5 638 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 CNIH2Q6PI25 160 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 PAPD4Q6PIY7 484 aaKnown RBP20.95■□□□□ 0.94
VPS16-201ENST00000380443 TMEM205Q6UW68 189 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 CPEB2Q7Z5Q1 589 aaKnown RBP20.95■□□□□ 0.94
VPS16-201ENST00000380443 IFI44Q8TCB0 444 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 ZPLD1Q8TCW7 415 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 TSPAN32Q96QS1 320 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 GFM1Q96RP9 751 aaKnown RBP20.95■□□□□ 0.94
VPS16-201ENST00000380443 TIGARQ9NQ88 270 aa20.95■□□□□ 0.94
VPS16-201ENST00000380443 NXT1Q9UKK6 140 aaKnown RBP20.95■□□□□ 0.94
VPS16-201ENST00000380443 HSPB2A8KAH6 182 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 PHYHO14832 338 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 SNPHO15079 494 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 SELENOFO60613 162 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 HPGDSO60760 199 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 MAP2K6P52564 334 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 BLVRAP53004 296 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 MFSD13AQ14CX5 517 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 HSPB2Q16082 182 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 LRRC28Q86X40 367 aaPredicted RBP20.94■□□□□ 0.94
VPS16-201ENST00000380443 ADGRG3Q86Y34 549 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 DUSP19Q8WTR2 217 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 RNF138Q8WVD3 245 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 ZNRF4Q8WWF5 429 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 NPAP1Q9NZP6 1156 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 GNG8Q9UK08 70 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 TMEM14AQ9Y6G1 99 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 CACNA1HO95180 2353 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 IGHV3-20A0A0C4DH32 117 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 TRBV2A0A0J9YWF9 115 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 PROB1E7EW31 1015 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 BOLA2-SMG1P6H3BVE0 249 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 KHNYNO15037 678 aaKnown RBP20.94■□□□□ 0.94
VPS16-201ENST00000380443 HLA-DQB1P01920 261 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 F13BP05160 661 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 CSF3P09919 207 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 TMED10P49755 219 aaKnown RBP20.94■□□□□ 0.94
VPS16-201ENST00000380443 HCCSP53701 268 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 ZNF684Q5T5D7 378 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 C1orf140Q5VVS0 124 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 UNQ9370/PRO34162Q6UXP9 181 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 SMAP2Q8WU79 429 aaPredicted RBP20.94■□□□□ 0.94
VPS16-201ENST00000380443 HGDQ93099 445 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 PTDSS2Q9BVG9 487 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 SLC22A4Q9H015 551 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 WDR54Q9H977 334 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 INIPQ9NRY2 104 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 TAS2R5Q9NYW4 299 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 ZNF346Q9UL40 294 aaKnown RBP20.94■□□□□ 0.94
VPS16-201ENST00000380443 COPS3Q9UNS2 423 aa20.94■□□□□ 0.94
VPS16-201ENST00000380443 A0A1W2PQ09 198 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 TMEM72A0PK05 275 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 SMIM30A4D0T7 59 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 ADAM10O14672 748 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 NCR1O76036 304 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 ZFAND5O76080 213 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 DXOO77932 396 aaKnown RBP20.93■□□□□ 0.94
VPS16-201ENST00000380443 AHSA1O95433 338 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 EDNRAP25101 427 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 MSX1P28360 303 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 DAB2P98082 770 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 IDNKQ5T6J7 187 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 EEF1A1P5Q5VTE0 462 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 KLHDC3Q9BQ90 382 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 WDR77Q9BQA1 342 aaPredicted RBP20.93■□□□□ 0.94
VPS16-201ENST00000380443 ZCCHC4Q9H5U6 513 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 PI4KAP42356 2102 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 VPS13AQ96RL7 3174 aa20.93■□□□□ 0.94
VPS16-201ENST00000380443 ARPC4-TTLL3A0A0A6YYG9 625 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 XKRYO14609 159 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 IGHMP01871 453 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 UCHL1P09936 223 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 SPNP16150 400 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 AZGP1P25311 298 aaKnown RBP20.92■□□□□ 0.94
VPS16-201ENST00000380443 APOBEC1P41238 236 aaKnown RBP20.92■□□□□ 0.94
VPS16-201ENST00000380443 COL28A1Q2UY09 1125 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 MESTQ5EB52 335 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 SFXN4Q6P4A7 337 aa20.92■□□□□ 0.94
VPS16-201ENST00000380443 RPTNQ6XPR3 784 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms