RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 A0A1W2PRG6 482 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 B4DXG7 233 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 PSMD9O00233 223 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 PLPP2O43688 288 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 TXNDC12O95881 172 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 ZNF883P0CG24 379 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 F8A1P23610 371 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 CAPZA2P47755 286 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 ZNF41P51814 821 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 GBX2P52951 348 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 SLC25A1P53007 311 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 SGCBQ16585 318 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 ZNF181Q2M3W8 571 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 DCAF12Q5T6F0 453 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 STK35Q8TDR2 534 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 ELP5Q8TE02 316 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 MRPL48Q96GC5 212 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 SYT4Q9H2B2 425 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 ABCB9Q9NP78 766 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 FAIMQ9NVQ4 179 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 RHBDL2Q9NX52 303 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 LOXL2Q9Y4K0 774 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 PCDHGB6Q9Y5F9 930 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 R4GN57 208 aa13.36□□□□□ -0.27
RAB3IP-203ENST00000378809 SHISA8B8ZZ34 492 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 DCTN6O00399 190 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 OR2T1O43869 369 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 NPIPB7O75200 414 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ITGA10O75578 1167 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 KLF7O75840 302 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SNX4O95219 450 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ETV6P41212 452 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 FOLR3P41439 243 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SUMO3P55854 103 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 RAB15P59190 212 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 FOXF1Q12946 379 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 DDI2Q5TDH0 399 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 LINC01590Q5TEZ4 76 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 LYSMD2Q8IV50 215 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 PM20D2Q8IYS1 436 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 OR2T4Q8NH00 348 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ZNF417Q8TAU3 575 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ASB15Q8WXK1 588 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SPACA9Q96E40 222 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 PELI1Q96FA3 418 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ZNF587Q96SQ5 575 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SMAD5Q99717 465 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 MROQ9BYG7 248 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 CCDC86Q9H6F5 360 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SDHAF3Q9NRP4 125 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ACOXLQ9NUZ1 547 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 MOKQ9UQ07 419 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 MPDZO75970 2070 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 LOC102723996A0A087X1L8 192 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SHISA3A0PJX4 238 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 H3BML4 177 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 FBXO45P0C2W1 286 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 TFPIP10646 304 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 GALP22466 123 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 AVPR2P30518 371 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 OXA1LQ15070 435 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 TRAM1Q15629 374 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 ACKR1Q16570 336 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 STEAP3Q658P3 488 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 C5orf46Q6UWT4 87 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 LYPD8Q6UX82 237 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 PLEKHG7Q6ZR37 379 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SLC22A16Q86VW1 577 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 SYS1Q8N2H4 156 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 OR2Y1Q8NGV0 311 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 GHSRQ92847 366 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 COMMD3Q9UBI1 195 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 PCDHGB2Q9Y5G2 931 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 HRH3Q9Y5N1 445 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 WIF1Q9Y5W5 379 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 HS3ST3B1Q9Y662 390 aa13.35□□□□□ -0.27
RAB3IP-203ENST00000378809 B4E171 279 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 STK17BO94768 372 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 COX6A1P12074 109 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 IL11P20809 199 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 EDNRAP25101 427 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 PSMB10P40306 273 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 TSPAN7P41732 249 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 CENPAP49450 140 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 CLDN6P56747 220 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 OR7A5Q15622 319 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 EXT1Q16394 746 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 NTRK2Q16620 822 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 CDONQ4KMG0 1287 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 FAM27D1Q5T7N8 215 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 DBX2Q6ZNG2 339 aa13.34□□□□□ -0.27
RAB3IP-203ENST00000378809 OR6V1Q8N148 313 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms