RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SSTR2P30874 369 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 LSSP48449 732 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 PRICKLE4Q2TBC4 344 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 FAM199XQ6PEV8 388 aaPredicted RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 PAQR6Q6TCH4 344 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 OR8S1Q8NH09 359 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 FCRL1Q96LA6 429 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 UTP23Q9BRU9 249 aaKnown RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 PLCXD1Q9NUJ7 323 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 KCND3Q9UK17 655 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 THSD7BQ9C0I4 1608 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF593O00488 134 aaPredicted RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 GABRPO00591 440 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 TNFSF14O43557 240 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 SULT1C4O75897 302 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 PLK5Q496M5 336 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 C6orf15Q6UXA7 325 aaPredicted RBP13□□□□□ -0.33
SHROOM1-203ENST00000378679 NOXA1Q86UR1 476 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 FCAMRQ8WWV6 532 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 NEDD4LQ96PU5 975 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 RASD1Q9Y272 281 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 LOXL2Q9Y4K0 774 aa13□□□□□ -0.33
SHROOM1-203ENST00000378679 TMEM269A0A1B0GVZ9 245 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ZC3H12DA2A288 527 aaKnown RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 M0R082 166 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ICMTO60725 284 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 OR2J2O76002 312 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 WDPCPO95876 746 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 LINC00271P0C7V0 271 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 CFL1P23528 166 aaKnown RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 RNF4P78317 190 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 SIRPAP78324 504 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 POU4F3Q15319 338 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 TCEAL6Q6IPX3 200 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 LAX1Q8IWV1 398 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF417Q8TAU3 575 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF587Q96SQ5 575 aaPredicted RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ULBP2Q9BZM5 246 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 SEMA4CQ9C0C4 833 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 FARSAQ9Y285 508 aaKnown RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 SDK2Q58EX2 2172 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 SIP14410 1827 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 SCO1O75880 301 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 IL1AP01583 271 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 SBK2P0C263 348 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 S100GP29377 79 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 GABRA5P31644 462 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ART1P52961 327 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 GPR85P60893 370 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ARMC10Q8N2F6 343 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 BEST4Q8NFU0 473 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 DHRS1Q96LJ7 313 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 EDEM2Q9BV94 578 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 CMC2Q9NRP2 79 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 MOKQ9UQ07 419 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 R4GN57 208 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ACOD1A6NK06 481 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 LCATP04180 440 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ERCC1P07992 297 aaPredicted RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 PGAM2P15259 253 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 PNLIPRP2P54317 469 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 BIDP55957 195 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 XKRXQ6PP77 449 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF704Q6ZNC4 412 aaPredicted RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 BPHLQ86WA6 291 aaPredicted RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 OR5M1Q8NGP8 315 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 CHRNA9Q9UGM1 479 aa12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 MCTS1Q9ULC4 181 aaKnown RBP12.99□□□□□ -0.33
SHROOM1-203ENST00000378679 ARRDC5A6NEK1 342 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 MSX1P28360 303 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 CYB561P49447 251 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PUDPQ08623 228 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 HAVCR2Q8TDQ0 301 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF764Q96H86 408 aaPredicted RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 WWTR1Q9GZV5 400 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC52A3Q9NQ40 469 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 TXNL4BQ9NX01 149 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 MYEF2Q9P2K5 600 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 RABL2BQ9UNT1 228 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 MKI67P46013 3256 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 FXYD6-FXYD2A0A087WZ82 144 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 HIST1H1CP16403 213 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 POU3F4P49335 361 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 RPL22L1Q6P5R6 122 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 USP51Q70EK9 711 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 KCTD20Q7Z5Y7 419 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 SERPINA12Q8IW75 414 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 OR1N1Q8NGS0 311 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 COQ8AQ8NI60 647 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF566Q969W8 418 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 GIMAP5Q96F15 307 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 CCNL2Q96S94 520 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms