RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 PDZD3Q86UT5 571 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ADIPOR2Q86V24 386 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 TMEM104Q8NE00 496 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 SPOCK3Q9BQ16 436 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 FZD8Q9H461 694 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 VDAC3Q9Y277 283 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 SH2D7A6NKC9 451 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 H3BQ06 376 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 NAGAP17050 411 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 TEKQ02763 1124 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 CRLF2Q9HC73 371 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ACSS1Q9NUB1 689 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 GMPR2Q9P2T1 348 aaKnown RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 GM2AP17900 193 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 UNC50Q53HI1 259 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 GPR26Q8NDV2 337 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 GKN1Q9NS71 199 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 HRH3Q9Y5N1 445 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 SPTBP11277 2137 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 IDUAP35475 653 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 LBHQ53QV2 105 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 DGAT2L6Q6ZPD8 337 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ADGRE4PQ86SQ3 457 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 LRRTM1Q86UE6 522 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 MMP21Q8N119 569 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 CLDN22Q8N7P3 220 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 OR2M3Q8NG83 312 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 C20orf24Q9BUV8 137 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 UCK1Q9HA47 277 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 KCTD3Q9Y597 815 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 DBX1A6NMT0 343 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 M0R3H8 397 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 PRAMEF4O60810 478 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 PFKMP08237 780 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 BMI1P35226 326 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 C12orf57Q99622 126 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 KCNG2Q9UJ96 466 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 SCML1Q9UN30 329 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 SCN2AQ99250 2005 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 PDGFAP04085 211 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 SIGLEC10Q96LC7 697 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 BARHL1Q9BZE3 327 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 C12orf10Q9HB07 376 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 IL37Q9NZH6 218 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 KIAA1456Q9P272 454 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 PTGDR2Q9Y5Y4 395 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 OR13C7P0DN81 318 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 C5AR1P21730 350 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 HOXA10P31260 410 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-205ENST00000376636 BCL7AQ4VC05 210 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 Q6ZVL8 140 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 LRRC18Q8N456 261 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 VGLL2Q8N8G2 317 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 FBXW5Q969U6 566 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 ZFYVE21Q9BQ24 234 aa10.85□□□□□ -0.67
VPS13A-205ENST00000376636 KIAA1324LA8MWY0 1029 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SLC43A1O75387 559 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 FCGR2AP12318 317 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SULT1A2P50226 295 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 OR5I1Q13606 314 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 OR52B6Q8NGF0 335 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 CABLES2Q9BTV7 478 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 GPR174Q9BXC1 333 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 RAB6CQ9H0N0 254 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 VRTNQ9H8Y1 702 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 COL5A2P05997 1499 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ZNF888P0CJ79 500 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 FDXRP22570 491 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 TNFSF8P32971 234 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 PSMB10P40306 273 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 RAB6CQ53S08 254 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 Q6ZTK2 550 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 CDC20BQ86Y33 519 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 RHOXF1Q8NHV9 184 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 MOKQ9UQ07 419 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 MN1Q10571 1320 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 FABP7O15540 132 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 KLF8O95600 359 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 GDNFP39905 211 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 REEP5Q00765 189 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 RNF113BQ8IZP6 322 aaKnown RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 TCTN2Q96GX1 697 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 PHOX2AO14813 284 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SNNO75324 88 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SNHG28P0DPA3 235 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 ICAM2P13598 275 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 AREGP15514 252 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 TRA2BP62995 288 aaKnown RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 HES1Q14469 280 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 KCNJ15Q99712 375 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SELENOIQ9C0D9 397 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 SLC25A32Q9H2D1 315 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 DDX31Q9H8H2 851 aaKnown RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 STRAPQ9Y3F4 350 aaKnown RBP10.84□□□□□ -0.67
VPS13A-205ENST00000376636 LAMP1P11279 417 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 KIR2DL3P43628 341 aa10.84□□□□□ -0.67
VPS13A-205ENST00000376636 HBA1P69905 142 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms