RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TMEM69Q5SWH9 247 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 METTL11BQ5VVY1 283 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 PWWP2BQ6NUJ5 590 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 STAC2Q6ZMT1 411 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 SLC16A9Q7RTY1 509 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 ZNF595Q8IYB9 648 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 SLC22A18ASQ8N1D0 253 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 EID2Q8N6I1 236 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 AVL9Q8NBF6 648 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.28
MSH5-201ENST00000375703 RADILQ96JH8 1075 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 GPX7Q96SL4 187 aaPredicted RBP13.27□□□□□ -0.28
MSH5-201ENST00000375703 SLITRK2Q9H156 845 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 SRA1Q9HD15 236 aaKnown RBP13.27□□□□□ -0.28
MSH5-201ENST00000375703 XIRP2A4UGR9 3374 aa13.27□□□□□ -0.28
MSH5-201ENST00000375703 REV3LO60673 3130 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 IGKV1D-42A0A075B6H8 117 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 TMEM127O75204 238 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 RAB40ALP0C0E4 278 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 BLVRAP53004 296 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 CTXN1P60606 82 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 C1orf61Q13536 156 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 C9orf50Q5SZB4 431 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 STPG1Q5TH74 334 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 LIPNQ5VXI9 398 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 FAM220AQ7Z4H9 259 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.29
MSH5-201ENST00000375703 OR5AK2Q8NH90 309 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 MAP6Q96JE9 813 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 MRI1Q9BV20 369 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 NOX3Q9HBY0 568 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 GLTPQ9NZD2 209 aa13.27□□□□□ -0.29
MSH5-201ENST00000375703 ARPC1BO15143 372 aaKnown RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 PRKNO60260 465 aaPredicted RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 MPC2O95563 127 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 IFNA16P05015 189 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 CD14P08571 375 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 CALCBP10092 127 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 PTHLHP12272 177 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 MAOAP21397 527 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 RABIFP47224 123 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 SOX2P48431 317 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ART1P52961 327 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 AP2S1P53680 142 aaPredicted RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 IKZF1Q13422 519 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ALKBH1Q13686 389 aaKnown RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 EXOSC2Q13868 293 aaKnown RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 Q499Y3 187 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 KLHL26Q53HC5 615 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ELFN2Q5R3F8 820 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 WBP2NLQ6ICG8 309 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ZNF440Q8IYI8 595 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 C19orf47Q8N9M1 422 aaKnown RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 FAM71CQ8NEG0 241 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 TAS2R10Q9NYW0 307 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 POMT2Q9UKY4 750 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 MOKQ9UQ07 419 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 F5P12259 2224 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ZSCAN5BA6NJL1 495 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 CTSEP14091 401 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 CDK2P24941 298 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 SLC25A1P53007 311 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 SKP1P63208 163 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 IGLV3-21P80748 117 aaPredicted RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 ALG10Q5BKT4 473 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 GPR139Q6DWJ6 353 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 SLC25A25Q6KCM7 469 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 OR6V1Q8N148 313 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 MOGAT1Q96PD6 335 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 GAS2L1Q99501 681 aaPredicted RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 CHIAQ9BZP6 476 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 FRRS1LQ9P0K9 344 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ANKRD20A5PA0PJZ0 165 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 SHOXO15266 292 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 UPK3AO75631 287 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 F13BP05160 661 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 PNMTP11086 282 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 HPGDP15428 266 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 RAD52P43351 418 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 P2RX1P51575 399 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 CCR4P51679 360 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 PUDPQ08623 228 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 FUT7Q11130 342 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 ZNF74Q16587 644 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 PRTGQ2VWP7 1150 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 TOR2AQ5JU69 321 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 TMEM184AQ6ZMB5 413 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 FAM122BQ7Z309 247 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 PARGQ86W56 976 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 FTMTQ8N4E7 242 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 HAVCR1Q96D42 359 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 NPDC1Q9NQX5 325 aaPredicted RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 UBQLN2Q9UHD9 624 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 MRM2Q9UI43 246 aaKnown RBP13.26□□□□□ -0.29
MSH5-201ENST00000375703 HIF3AQ9Y2N7 669 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 KLHDC2Q9Y2U9 406 aa13.26□□□□□ -0.29
MSH5-201ENST00000375703 AUP1Q9Y679 476 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms