RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 HPGDP15428 266 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 MYL9P24844 172 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 ARHGAP40Q5TG30 622 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 SHISA6Q6ZSJ9 500 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 CEACAM19Q7Z692 300 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 ZNF440Q8IYI8 595 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 ABHD4Q8TB40 342 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 ZMYND19Q96E35 227 aaPredicted RBP14.13□□□□□ -0.15
CCDC40-202ENST00000374876 ICAM5Q9UMF0 924 aa14.13□□□□□ -0.15
CCDC40-202ENST00000374876 MEIOCA2RUB1 952 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 C9J4A7 227 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 LRRN3E7EW58 273 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 SHC1P29353 583 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 PYCR1P32322 319 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 GALNSP34059 522 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 RPS5P46782 204 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 RPS15P62841 145 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 BIKQ13323 160 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 P2RY14Q15391 338 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 KLHL26Q53HC5 615 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 VWA2Q5GFL6 755 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 HBMQ6B0K9 141 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 RPTNQ6XPR3 784 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 DPY19L2P2Q6ZN68 376 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 UBE2J2Q8N2K1 259 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ZNF527Q8NB42 609 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 OR7G1Q8NGA0 311 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ENKURQ8TC29 256 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 C3orf49Q96BT1 292 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 CNN2Q99439 309 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 HOXD1Q9GZZ0 328 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 CTSFQ9UBX1 484 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 GPN3Q9UHW5 284 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ZNF221Q9UK13 617 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 POU2F3Q9UKI9 436 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ZNF337Q9Y3M9 751 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ADAM18Q9Y3Q7 739 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 NOX1Q9Y5S8 564 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 LOC400499M0QZD8 3231 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 C21orf140B9A014 251 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 PLA2G10O15496 165 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 NKX2-8O15522 239 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 FBLP22087 321 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ACVR1BP36896 505 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 LGALS3BPQ08380 585 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 MRPL14Q6P1L8 145 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 MED25Q71SY5 747 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 OVCH1Q7RTY7 1134 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 NR2C2APQ86WQ0 139 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 PRSS58Q8IYP2 241 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 GATSQ8NAP1 163 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 POMGNT2Q8NAT1 580 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 C17orf47Q8NEP4 570 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 OR51L1Q8NGJ5 315 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 OR5J2Q8NH18 312 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 MVB12AQ96EY5 273 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 GPR87Q9BY21 358 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 PPIL3Q9H2H8 161 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 PNO1Q9NRX1 252 aaKnown RBP14.12□□□□□ -0.15
CCDC40-202ENST00000374876 PCDHGB7Q9Y5F8 929 aa14.12□□□□□ -0.15
CCDC40-202ENST00000374876 ELOA3DA6NLF2 546 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 PRKNO60260 465 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 KLF7O75840 302 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 OR7A10O76100 309 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ONECUT2O95948 504 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 HLA-DQB1P01920 261 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 CLPSP04118 112 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 INPP1P49441 399 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 NKX2-5P52952 324 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 NRG3P56975 720 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ACTA2P62736 377 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ACTG2P63267 376 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 PON3Q15166 354 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ELOA3BQ3SY89 546 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 FAM27D1Q5T7N8 215 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ATP1A1-AS1Q5TC04 95 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 SSX6Q7RTT6 188 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 TPRA1Q86W33 373 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 RDH10Q8IZV5 341 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 ELOA3Q8NG57 546 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 OR6F1Q8NGZ6 308 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 KCTD12Q96CX2 325 aaKnown RBP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 LMF1Q96S06 567 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 TTTY10Q9BZA0 68 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 SLC19A3Q9BZV2 496 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 MOV10Q9HCE1 1003 aaKnown RBP14.11□□□□□ -0.15
CCDC40-202ENST00000374876 UBQLN4Q9NRR5 601 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 TCFL5Q9UL49 500 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 USP24Q9UPU5 2620 aa14.11□□□□□ -0.15
CCDC40-202ENST00000374876 B4DXG7 233 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 RAB40ALP0C0E4 278 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 OR2T7P0C7T2 308 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 PRKAR1AP10644 381 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 ELK1P19419 428 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 NAA10P41227 235 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-202ENST00000374876 CCR4P51679 360 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 HCCSP53701 268 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 CXADRP78310 365 aa14.1□□□□□ -0.15
CCDC40-202ENST00000374876 RIN1Q13671 783 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms