RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 A8MVM7 634 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 MAGEB4O15481 346 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 MYF5P13349 255 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 HOXD12P35452 270 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 OR1Q1Q15612 314 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 B3GLCTQ6Y288 498 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 NKX3-1Q99801 234 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 ULBP2Q9BZM5 246 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 GABRPO00591 440 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 AIFM1O95831 613 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 CPMP14384 443 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 PAX6P26367 422 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 IVDP26440 423 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 SLC30A7Q8NEW0 376 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 FAM173AQ9BQD7 235 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TINAGL1Q9GZM7 467 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 HS3ST2Q9Y278 367 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TOGARAM1Q9Y4F4 1720 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 SEC14L6B5MCN3 397 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 IGHG1P01857 330 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 C9orf152Q5JTZ5 239 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 METTL4Q8N3J2 472 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TMEM163Q8TC26 289 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
TRAF1-201ENST00000373887 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 TRPM3Q9HCF6 1732 aaPredicted RBP13.28□□□□□ -0.28
TRAF1-201ENST00000373887 RNF212BA8MTL3 300 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 SMLR1H3BR10 107 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 SNCAP37840 140 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 TAS2R46P59540 309 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 UBE2G2P60604 165 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 RAB40BQ12829 278 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 EGLN2Q96KS0 407 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 MKRN2Q9H000 416 aaKnown RBP13.27□□□□□ -0.28
TRAF1-201ENST00000373887 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 STEAP1Q9UHE8 339 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 OSGIN1Q9UJX0 560 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 EIF3FO00303 357 aaPredicted RBP13.27□□□□□ -0.28
TRAF1-201ENST00000373887 P2RX6O15547 441 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 EMP3P54852 163 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 MFGE8Q08431 387 aaPredicted RBP13.27□□□□□ -0.28
TRAF1-201ENST00000373887 LTB4RQ15722 352 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 FAM58AQ8N1B3 248 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 CCDC74AQ96AQ1 378 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 TSSK2Q96PF2 358 aa13.27□□□□□ -0.28
TRAF1-201ENST00000373887 PHIPQ8WWQ0 1821 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
TRAF1-201ENST00000373887 SNRPBP14678 240 aaKnown RBP13.27□□□□□ -0.29
TRAF1-201ENST00000373887 SPCS2Q15005 226 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 ESPNLQ6ZVH7 1005 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 SLC35D2Q76EJ3 337 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 PRICKLE2Q7Z3G6 844 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 ADIPOR2Q86V24 386 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 WBP2Q969T9 261 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 FGF21Q9NSA1 209 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 GNG12Q9UBI6 72 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 SLC35A3Q9Y2D2 325 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 A0A1B0GVG6 124 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 DLX5P56178 289 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 MRPS10P82664 201 aaKnown RBP13.27□□□□□ -0.29
TRAF1-201ENST00000373887 OR8B8Q15620 311 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 MPEG1Q2M385 716 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 ASB11Q8WXH4 323 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 ARPC5LQ9BPX5 153 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 OR11A1Q9GZK7 315 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 I6L893 689 aaPredicted RBP13.27□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF749O43361 778 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 GSK3AP49840 483 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 RACK1P63244 317 aaKnown RBP13.27□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF92Q03936 586 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 PKDCCQ504Y2 493 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 OR2G6Q5TZ20 316 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 CALHM2Q9HA72 323 aa13.27□□□□□ -0.29
TRAF1-201ENST00000373887 BOKQ9UMX3 212 aaPredicted RBP13.27□□□□□ -0.29
TRAF1-201ENST00000373887 GABARAPH6UMI1 98 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 UGDHO60701 494 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 GABARAPO95166 117 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 NSA2O95478 260 aaKnown RBP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 MMP2P08253 660 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 TNFSF8P32971 234 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 MTCP1P56278 107 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 HES1Q14469 280 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 SF3B4Q15427 424 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ADIRFQ15847 76 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF750Q32MQ0 723 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF718Q3SXZ3 478 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF684Q5T5D7 378 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CPZQ66K79 652 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 MFSD9Q8NBP5 474 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 PATE1Q8WXA2 126 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 REEP6Q96HR9 211 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 HDAC8Q9BY41 377 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 ZNF816-ZNF321PA0A0X1KG74 233 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 GFRA2O00451 464 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A6P0DMU7 189 aa13.26□□□□□ -0.29
TRAF1-201ENST00000373887 CT45A5P0DMU8 189 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms