RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZAR1LA6NP61 321 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 A8MXE2 369 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 TEX22C9J3V5 150 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 DLGAP1O14490 977 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 SOCS2O14508 198 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 PEX1O43933 1283 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 NGFRP08138 427 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 PRKAR1AP10644 381 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ICAM2P13598 275 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 HOXB6P17509 224 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 IL12BP29460 328 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 RRM2P31350 389 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 TTKP33981 857 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ATP6V1E1P36543 226 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ZNF41P51814 821 aaPredicted RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 CHN2P52757 468 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 HMGA2P52926 109 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 RGS8P57771 180 aaPredicted RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 PSPHP78330 225 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 SKP2Q13309 424 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 GANABQ14697 944 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 NTRK2Q16620 822 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 EXOC3L2Q2M3D2 409 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 ACER2Q5QJU3 275 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 TRAT1Q6PIZ9 186 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CRIP3Q6Q6R5 217 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CBLN3Q6UW01 205 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 IL20RBQ6UXL0 311 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 GRAMD2AQ8IUY3 354 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CBR4Q8N4T8 237 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 OR10G3Q8NGC4 313 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 OR52J3Q8NH60 311 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 FGF11Q92914 225 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 SPACA9Q96E40 222 aaPredicted RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 TRMT61AQ96FX7 289 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 ZNF347Q96SE7 839 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 MCHR1Q99705 422 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 PTDSS2Q9BVG9 487 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 NMNAT1Q9HAN9 279 aaPredicted RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 PROK2Q9HC23 129 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 SH2D2AQ9NP31 389 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 MRTO4Q9UKD2 239 aaKnown RBP3.21□□□□□ -1.9
MCF2-202ENST00000370573 SLC9A8Q9Y2E8 581 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CARD8Q9Y2G2 431 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 U3KQV3 271 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CFAP47Q6ZTR5 3102 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 MGAQ8IWI9 3026 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 CACNA1AO00555 2505 aa3.21□□□□□ -1.9
MCF2-202ENST00000370573 A0A1W2PQD3 144 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GAGE10A6NGK3 116 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ARGFXA6NJG6 315 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CPSF4LA6NMK7 179 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 TNFRSF11BO00300 401 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GNGT2O14610 69 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SCO2O43819 266 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ANGPTL1O95841 491 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CSTAP01040 98 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 QDPRP09417 244 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 UBTFL6P0CB48 400 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 ITGA2P17301 1181 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 EVI2BP34910 448 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 RYKP34925 604 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GRK5P34947 590 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 VHLP40337 213 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CASP3P42574 277 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SSR4P51571 173 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CDH12P55289 794 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SPIBQ01892 262 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZNF117Q03924 483 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 AIMP2Q13155 320 aaKnown RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 OR1Q1Q15612 314 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 INPP5JQ15735 1006 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 TOMM34Q15785 309 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 TBRG1Q3YBR2 411 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 EIPR1Q53HC9 387 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CMPK2Q5EBM0 449 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ENTPD8Q5MY95 495 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 CCDC144NLQ6NUI1 221 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 ZBTB49Q6ZSB9 765 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 GDF7Q7Z4P5 450 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 NKAIN4Q8IVV8 208 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 BEST3Q8N1M1 668 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 OR5K1Q8NHB7 308 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 IL17DQ8TAD2 202 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SLC22A8Q8TCC7 542 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 DUSP19Q8WTR2 217 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 SH3YL1Q96HL8 342 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 KLHL15Q96M94 604 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 IP6K3Q96PC2 410 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 PRSS27Q9BQR3 290 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 LAT2Q9GZY6 243 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 LHPPQ9H008 270 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 TRIM45Q9H8W5 580 aaPredicted RBP3.2□□□□□ -1.9
MCF2-202ENST00000370573 GALNT9Q9HCQ5 603 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 PPP1R14DQ9NXH3 145 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 KLHL28Q9NXS3 571 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 STMN3Q9NZ72 180 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 COQ3Q9NZJ6 369 aa3.2□□□□□ -1.9
MCF2-202ENST00000370573 HSPB7Q9UBY9 170 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms