RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 DIO2Q92813 273 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 UCN3Q969E3 161 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 RBM24Q9BX46 236 aaKnown RBP14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SPNS1Q9H2V7 528 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 HINT3Q9NQE9 182 aaKnown RBP14.74□□□□□ -0.05
COL17A1-202ENST00000369733 VDAC3Q9Y277 283 aa14.74□□□□□ -0.05
COL17A1-202ENST00000369733 TIMM8BQ9Y5J9 83 aaPredicted RBP14.74□□□□□ -0.05
COL17A1-202ENST00000369733 SBK2P0C263 348 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 PVRP15151 417 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SOX18P35713 384 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 DSC1Q08554 894 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SIGIRRQ6IA17 410 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SLC48A1Q6P1K1 146 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 CALHM3Q86XJ0 350 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SLC39A11Q8N1S5 342 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 LOC100289279A0A1B0GTE1 492 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 ACY1Q03154 408 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 OR10K2Q6IF99 312 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 H3F3CQ6NXT2 135 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SLC25A31Q9H0C2 315 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 DZANK1Q9NVP4 752 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 GMEB2Q9UKD1 530 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 HIDE1A8MVS5 230 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 RTL6Q6ICC9 239 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 TEX261Q6UWH6 196 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 TMEFF1Q8IYR6 380 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 ZFP82Q8N141 532 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF511Q8NB15 262 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 ATF6BQ99941 703 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 ARHGAP9Q9BRR9 750 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SLCO5A1Q9H2Y9 848 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 U3KQ87 197 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 WDPCPO95876 746 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 CTHP32929 405 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 OR10A3P58181 314 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SSX2Q16385 188 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 C17orf99Q6UX52 265 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 WFDC5Q8TCV5 224 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SLC22A12Q96S37 553 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 SFXN1Q9H9B4 322 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF225Q9UK10 706 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 FLVCR2Q9UPI3 526 aa14.73□□□□□ -0.05
COL17A1-202ENST00000369733 DUX1O43812 170 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 LCATP04180 440 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 RAB4BP61018 213 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 MFSD12Q6NUT3 480 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 Q6ZTK2 550 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 NLGN4YQ8NFZ3 816 aaPredicted RBP14.72□□□□□ -0.05
COL17A1-202ENST00000369733 NMNAT2Q9BZQ4 307 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 KIAA1551Q9HCM1 1747 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SERPINE2P07093 398 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 AGAP14A8MT82 685 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 STK17BO94768 372 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 TSPAN12O95859 305 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF136P52737 540 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 TCTN3Q6NUS6 607 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SLC22A25Q6T423 547 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF611Q8N823 705 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SLC16A11Q8NCK7 471 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 ZMAT3Q9HA38 289 aaKnown RBP14.72□□□□□ -0.05
COL17A1-202ENST00000369733 ACOXLQ9NUZ1 547 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 C1orf123Q9NWV4 160 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 CNR1P21554 472 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 HNRNPA2B1P22626 353 aaKnown RBP14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SFTPDP35247 375 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 FASLGP48023 281 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 TPBGQ13641 420 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 ZNF620Q6ZNG0 422 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 OR5B2Q96R09 309 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 ULBP3Q9BZM4 244 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 EPHX3Q9H6B9 360 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 CCSO14618 274 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SYNGR4O95473 234 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 PCMT1P22061 227 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 OR51Q1Q8NH59 317 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SGCZQ96LD1 299 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 SLC6A13Q9NSD5 602 aa14.72□□□□□ -0.05
COL17A1-202ENST00000369733 RREB1Q92766 1687 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 CALCBP10092 127 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 DHPSP49366 369 aaPredicted RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 PAN3Q58A45 887 aaKnown RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 SLC35D3Q5M8T2 416 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 OR56B2PQ8NGI1 322 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 RAB3CQ96E17 227 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 HRASLSQ9HDD0 168 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 SLC23A1Q9UHI7 598 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 HCCSP53701 268 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 RPL23AP62750 156 aaKnown RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 RIN1Q13671 783 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 LPCAT3Q6P1A2 487 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 RDH10Q8IZV5 341 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 FAM160A2Q8N612 972 aaPredicted RBP14.71□□□□□ -0.05
COL17A1-202ENST00000369733 OR9A4Q8NGU2 314 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 C2CD4CQ8TF44 421 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 RASD2Q96D21 266 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 SLC25A32Q9H2D1 315 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 SIRT5Q9NXA8 310 aa14.71□□□□□ -0.05
COL17A1-202ENST00000369733 KIF25Q9UIL4 384 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms