RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ZNF629Q9UEG4 869 aaPredicted RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 MAGED1Q9Y5V3 778 aaPredicted RBP12.35□□□□□ -0.43
TPM3-211ENST00000368531 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
TPM3-211ENST00000368531 PCNX1Q96RV3 2341 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 RP1L1Q8IWN7 2480 aaPredicted RBP12.34□□□□□ -0.43
TPM3-211ENST00000368531 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 IGKV3D-15A0A087WSY6 115 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 HTR3EA5X5Y0 456 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 UNC119BA6NIH7 251 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ZNF724A8MTY0 619 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 GPR171O14626 319 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 FZD7O75084 574 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 VAMP5O95183 116 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 GASTP01350 101 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 CRHP06850 196 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 FCGR1AP12314 374 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 NTF4P34130 210 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 SLC16A1P53985 500 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 POU3F1Q03052 451 aaPredicted RBP12.34□□□□□ -0.43
TPM3-211ENST00000368531 GUSBP1Q15486 140 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ZBED5Q49AG3 693 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ANKRD34AQ69YU3 496 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 CASP12Q6UXS9 341 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 AAED1Q7RTV5 226 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 GALNT5Q7Z7M9 940 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 EPHX4Q8IUS5 362 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ZNF100Q8IYN0 542 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ZNF808Q8N4W9 903 aaPredicted RBP12.34□□□□□ -0.43
TPM3-211ENST00000368531 ZIC4Q8N9L1 334 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ZNF610Q8N9Z0 462 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ICA1LQ8NDH6 482 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 ADPRHL1Q8NDY3 354 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 LILRB4Q8NHJ6 448 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 LIPHQ8WWY8 451 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 TXNDC15Q96J42 360 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 PKP2Q99959 881 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 BDH2Q9BUT1 245 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
TPM3-211ENST00000368531 MRPL33O75394 65 aaKnown RBP12.33□□□□□ -0.44
TPM3-211ENST00000368531 BAG2O95816 211 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 IL18BPO95998 194 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 IGHV3-9P01782 118 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 IFNGR1P15260 489 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 EDNRAP25101 427 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 RPL4P36578 427 aaKnown RBP12.33□□□□□ -0.44
TPM3-211ENST00000368531 SLC9A3P48764 834 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 ZP4Q12836 540 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 CARD17Q5XLA6 110 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 ZNF770Q6IQ21 691 aaPredicted RBP12.33□□□□□ -0.44
TPM3-211ENST00000368531 C1orf94Q6P1W5 598 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 NIPAL3Q6P499 406 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 PXKQ7Z7A4 578 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 LINC00471Q8N535 108 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 OR6K3Q8NGY3 331 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 OR5K1Q8NHB7 308 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 FEVQ99581 238 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 TACO1Q9BSH4 297 aaKnown RBP12.33□□□□□ -0.44
TPM3-211ENST00000368531 MCCC2Q9HCC0 563 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 GP6Q9HCN6 339 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 MED29Q9NX70 200 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 IL20RAQ9UHF4 553 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 PRSS50Q9UI38 385 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 NOX1Q9Y5S8 564 aa12.33□□□□□ -0.44
TPM3-211ENST00000368531 SMG1Q96Q15 3661 aaKnown RBP12.32□□□□□ -0.44
TPM3-211ENST00000368531 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 LOC102725191A0A1B0GVB3 256 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 SAC3D1A6NKF1 404 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 G3V2T6 193 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 KLF4O43474 513 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 TRAF3IP2O43734 574 aaPredicted RBP12.32□□□□□ -0.44
TPM3-211ENST00000368531 CLDN14O95500 239 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 CGAP01215 116 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 ZNF23P17027 643 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 UQCRC1P31930 480 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 GSSP48637 474 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 SELENOPP49908 381 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 BIDP55957 195 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 CTXN1P60606 82 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 TSPAN31Q12999 210 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 TOP3AQ13472 1001 aaPredicted RBP12.32□□□□□ -0.44
TPM3-211ENST00000368531 FHL1Q13642 323 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 MELKQ14680 651 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 POU4F3Q15319 338 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 SHQ1Q6PI26 577 aaKnown RBP12.32□□□□□ -0.44
TPM3-211ENST00000368531 SLC35D2Q76EJ3 337 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 UBE2J2Q8N2K1 259 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 CENPNQ96H22 339 aaPredicted RBP12.32□□□□□ -0.44
TPM3-211ENST00000368531 NIPSNAP1Q9BPW8 284 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 ENKD1Q9H0I2 346 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 PIGMQ9H3S5 423 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 KCNJ16Q9NPI9 418 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 PLSCR4Q9NRQ2 329 aa12.32□□□□□ -0.44
TPM3-211ENST00000368531 MGAT4BQ9UQ53 548 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms