RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 HIST1H2ABP04908 130 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 MSMBP08118 114 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 RHOXF2BP0C7M4 288 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 ANXA7P20073 488 aaKnown RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 PGCP20142 388 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 HIST1H2ADP20671 130 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 MT3P25713 68 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 TMED10P49755 219 aaKnown RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 ZNF83P51522 516 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 SEC61A1P61619 476 aaKnown RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 ACVR1Q04771 509 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 UGT2A3Q6UWM9 527 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 HIST3H2AQ7L7L0 130 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 BHLHA15Q7RTS1 189 aaPredicted RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 PIWIL4Q7Z3Z4 852 aaKnown RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 SDCCAG8Q86SQ7 713 aaPredicted RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 OR8K1Q8NGG5 319 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 TRPC4APQ8TEL6 797 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 HGDQ93099 445 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 NEIL2Q969S2 332 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 TMIGD2Q96BF3 282 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 MS4A6EQ96DS6 147 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 RBM18Q96H35 190 aaKnown RBP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 TSNARE1Q96NA8 513 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 INPP5KQ9BT40 448 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 NARFLQ9H6Q4 476 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 LRRC40Q9H9A6 602 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.43
H3F3A-201ENST00000366813 CMAHPQ9Y471 501 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 HYOU1Q9Y4L1 999 aa6.09□□□□□ -1.43
H3F3A-201ENST00000366813 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 A0A087X0T9 212 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 GOLGA8QA0A0J9YX86 632 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 GOLGA8OA6NCC3 632 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 LRIT2A6NDA9 550 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 GOLGA8NF8WBI6 632 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 GOLGA8RI6L899 631 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 OGG1O15527 345 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 ZNF500O60304 480 aaPredicted RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 LYZL6O75951 148 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 PNPP00491 289 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 FAM228BP0C875 321 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 BRWD1-AS2P59051 145 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 STXBP1P61764 594 aaKnown RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 REEP5Q00765 189 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 ZNHIT3Q15649 155 aaPredicted RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 NNATQ16517 81 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 DECR1Q16698 335 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 ZNF628Q5EBL2 1059 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 RAET1LQ5VY80 246 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 C16orf54Q6UWD8 224 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 TFAP2EQ6VUC0 442 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 NUFIP2Q7Z417 695 aaKnown RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 OTUD6BQ8N6M0 293 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 ZBTB8BQ8NAP8 495 aaPredicted RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 SYT14Q8NB59 555 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 OR1J2Q8NGS2 313 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 LPGAT1Q92604 370 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 GTF3AQ92664 365 aaKnown RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 MUCL1Q96DR8 90 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 C3orf30Q96M34 536 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 SERINC2Q96SA4 455 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 MAPKAP1Q9BPZ7 522 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 NUDT16L1Q9BRJ7 211 aaKnown RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 RSPO3Q9BXY4 272 aaPredicted RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 PCDHGB4Q9UN71 923 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 PDE10AQ9Y233 779 aa6.08□□□□□ -1.44
H3F3A-201ENST00000366813 MRPS18CQ9Y3D5 142 aaKnown RBP6.08□□□□□ -1.44
H3F3A-201ENST00000366813 WNK2Q9Y3S1 2297 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 OR6C76A6NM76 312 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 E5RI56 91 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 LYNX1G3V0Z9 82 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 UGT2B11O75310 529 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 KDM4BO94953 1096 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 F7P08709 466 aaPredicted RBP6.07□□□□□ -1.44
H3F3A-201ENST00000366813 MPC1LP0DKB6 136 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 LYNX1P0DP58 116 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 DAOP14920 347 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 AGTR1P30556 359 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 APOBEC1P41238 236 aaKnown RBP6.07□□□□□ -1.44
H3F3A-201ENST00000366813 GRIA1P42261 906 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 TUBA1BP68363 451 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 IGLV3-21P80748 117 aaPredicted RBP6.07□□□□□ -1.44
H3F3A-201ENST00000366813 HMGCS1Q01581 520 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 ZNF155Q12901 538 aaPredicted RBP6.07□□□□□ -1.44
H3F3A-201ENST00000366813 BAMBIQ13145 260 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 MAD2L1Q13257 205 aaPredicted RBP6.07□□□□□ -1.44
H3F3A-201ENST00000366813 RCN2Q14257 317 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 TAF9Q16594 264 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.07□□□□□ -1.44
H3F3A-201ENST00000366813 NUP54Q7Z3B4 507 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 CLDND2Q8NHS1 167 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 NANPQ8TBE9 248 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 SLC5A11Q8WWX8 675 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 TAAR8Q969N4 342 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 ADIPOR1Q96A54 375 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 PPP1R2P1Q96PQ5 205 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 C1QTNF6Q9BXI9 259 aa6.07□□□□□ -1.44
H3F3A-201ENST00000366813 TREM2Q9NZC2 230 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms