RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MEX3DQ86XN8 651 aaKnown RBP10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TSACCQ96A04 125 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC46A1Q96NT5 459 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC25A32Q9H2D1 315 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 CYSLTR2Q9NS75 346 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 CLEC2LP0C7M8 214 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 C12orf73Q69YU5 71 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TGM7Q96PF1 710 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 KIR3DX1Q9H7L2 352 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 WIF1Q9Y5W5 379 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMEM72A0PK05 275 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 CEBPBP17676 345 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 FAM122BQ7Z309 247 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZNF442Q9H7R0 627 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 MED20Q9H944 212 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 HCFC1R1Q9NWW0 138 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 PLEKHM1Q9Y4G2 1056 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SURF4O15260 269 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 MPIG6BO95866 241 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 HRGP04196 525 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMEM164Q5U3C3 297 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 STEAP1BQ6NZ63 245 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SERPINA12Q8IW75 414 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 LFNGQ8NES3 379 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 FAM3DQ96BQ1 224 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 BORCS8Q96FH0 119 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 INSM2Q96T92 566 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 DHRS9Q9BPW9 319 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 ARPC5LQ9BPX5 153 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 NYNRINQ9P2P1 1898 aaKnown RBP10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 WNK2Q9Y3S1 2297 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMEM269A0A1B0GVZ9 245 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 RFX2P48378 723 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 CTBSQ01459 385 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 MELKQ14680 651 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 MTFR2Q6P444 385 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 LMNTD1Q8N9Z9 388 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 HHIPL1Q96JK4 782 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC22A12Q96S37 553 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC25A31Q9H0C2 315 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZNF740Q8NDX6 193 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 OR51T1Q8NGJ9 327 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 PHOSPHO2Q8TCD6 241 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 DUSP19Q8WTR2 217 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 BTF3L4Q96K17 158 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 H3BNC9 293 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 GNRHRP30968 328 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 MFGE8Q08431 387 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TECPR1Q7Z6L1 1165 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMEM255BQ8WV15 326 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TSPAN10Q9H1Z9 355 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 C1orf123Q9NWV4 160 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 MMACHCQ9Y4U1 282 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 CFAP77Q6ZQR2 320 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 SIRT5Q9NXA8 310 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 TMPRSS11EQ9UL52 423 aa10.91□□□□□ -0.66
CDC42BPA-202ENST00000366764 A0A0A6YYJ9 748 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 GMDSO60547 372 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 MMP15P51511 669 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 PER3P56645 1201 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 HMGCLL1Q8TB92 370 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 WDR34Q96EX3 536 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 TEAD3Q99594 435 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 NICN1Q9BSH3 213 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SBF1O95248 1867 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 LDB3O75112 727 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 TPPPO94811 219 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 THEGLP0DJG4 465 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 BCL6P41182 706 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 KIAA1024LP59773 190 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 ZNF683Q8IZ20 524 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 NLGN4XQ8N0W4 816 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC22A24Q8N4F4 322 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 Q8N9G6 341 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 TSPAN11A1L157 253 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 ACOD1A6NK06 481 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 DVL2O14641 736 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 GPR137BO60478 399 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 CHATP28329 748 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 MCATQ8IVS2 390 aaKnown RBP10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC16A11Q8NCK7 471 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 TVP23AA6NH52 213 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 TNFRSF10CO14798 259 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SEC14L5O43304 696 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 RAB5CP51148 216 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SOWAHCQ53LP3 525 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SLC25A30Q5SVS4 291 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 SFXN2Q96NB2 322 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 DNTTIP1Q9H147 329 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 PLEKHJ1Q9NW61 149 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 KDM4EB2RXH2 506 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 CCNJQ5T5M9 372 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■■□□□ 14.3
CDC42BPA-202ENST00000366764 TTLL10Q6ZVT0 673 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 TRHRP34981 398 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 BSGP35613 385 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 CCR6P51684 374 aa10.9□□□□□ -0.66
CDC42BPA-202ENST00000366764 FABP5Q01469 135 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms