RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SOX2P48431 317 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 VEGFCP49767 419 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 CTXN1P60606 82 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 LCN6P62502 163 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 FUT7Q11130 342 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 KLHL26Q53HC5 615 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TMEM255AQ5JRV8 349 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TMEM69Q5SWH9 247 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 FAM69AQ5T7M9 428 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SLC6A19Q695T7 634 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 CBLN3Q6UW01 205 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 MED25Q71SY5 747 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ZNF615Q8N8J6 731 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SYNPRQ8TBG9 265 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ADAMTS18Q8TE60 1221 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 CLIP3Q96DZ5 547 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SLITRK2Q9H156 845 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TCF7L1Q9HCS4 588 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 HRASLSQ9HDD0 168 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 B3GNT2Q9NY97 397 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ELF5Q9UKW6 265 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 HIF3AQ9Y2N7 669 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 U3KQ87 197 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 CACNA1CQ13936 2221 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 BLACEA4D250 179 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SCDO00767 359 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SRPX2O60687 465 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 TOXO94900 526 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ECDO95905 644 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 HPXP02790 462 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 RAF1P04049 648 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TPOP07202 933 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 PNMTP11086 282 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 POU3F3P20264 500 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 DNASE1P24855 282 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SDHAP31040 664 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ZNF81P51508 661 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 CCR9P51686 369 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 AP3S2P59780 193 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 LIPNQ5VXI9 398 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 SLC16A9Q7RTY1 509 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 FAM122BQ7Z309 247 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ATG4DQ86TL0 474 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 OR8H3Q8N146 312 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 FAM71CQ8NEG0 241 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 ZNF680Q8NEM1 530 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 OR11G2Q8NGC1 345 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TOE1Q96GM8 510 aaKnown RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 ZNF578Q96N58 590 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 LRRC61Q9BV99 259 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 OR10A4Q9H209 315 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 PLEKHA1Q9HB21 404 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 MMP25Q9NPA2 562 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 DIABLOQ9NR28 239 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 DLL4Q9NR61 685 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 RABL2AQ9UBK7 228 aaPredicted RBP7.83□□□□□ -1.16
RFX3-202ENST00000358730 KLK11Q9UBX7 282 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 PRODH2Q9UF12 536 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 CD207Q9UJ71 328 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 RABL2BQ9UNT1 228 aa7.83□□□□□ -1.16
RFX3-202ENST00000358730 TVP23AA6NH52 213 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 C17orf105B2RV13 164 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 DCTN6O00399 190 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 GMFGO60234 142 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 TACSTD2P09758 323 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 PTHLHP12272 177 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 SSTR2P30874 369 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 SLC25A1P53007 311 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 ZP1P60852 638 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 SKP2Q13309 424 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 Q499Y3 187 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 ZNF684Q5T5D7 378 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 STPG1Q5TH74 334 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 KIAA0895LQ68EN5 471 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 PWWP2BQ6NUJ5 590 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 FAAP20Q6NZ36 180 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 STAC2Q6ZMT1 411 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 OR5AK2Q8NH90 309 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 FCAMRQ8WWV6 532 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 RNF166Q96A37 237 aaPredicted RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 S100A16Q96FQ6 103 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 ADAD1Q96M93 576 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 SRA1Q9HD15 236 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 UBQLN4Q9NRR5 601 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 SOHLH2Q9NX45 425 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 EIF3KQ9UBQ5 218 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 OR5V1Q9UGF6 321 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 MRM2Q9UI43 246 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 IKZF2Q9UKS7 526 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 MMP17Q9ULZ9 603 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 TMEM184BQ9Y519 407 aaPredicted RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 SLCO1B1Q9Y6L6 691 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 RNF215Q9Y6U7 377 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 ALPK2Q86TB3 2170 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 ARPC1BO15143 372 aaKnown RBP7.82□□□□□ -1.16
RFX3-202ENST00000358730 UPK3AO75631 287 aa7.82□□□□□ -1.16
RFX3-202ENST00000358730 SLC22A5O76082 557 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms