RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 REG4Q9BYZ8 158 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 PLEKHA1Q9HB21 404 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 NANSQ9NR45 359 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF223Q9UK11 482 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 SLC13A4Q9UKG4 626 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 RARRES3Q9UL19 164 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 ZNF780BQ9Y6R6 833 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 SPACA6W5XKT8 324 aa11.59□□□□□ -0.55
RTFDC1-202ENST00000357348 COL27A1Q8IZC6 1860 aaPredicted RBP11.58□□□□□ -0.55
RTFDC1-202ENST00000357348 DAPL1A0PJW8 107 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 FAM183AA6NL82 134 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 LRRN3E7EW58 273 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 SNAPC5O75971 98 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 RAB3BP20337 219 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 SSTR2P30874 369 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 CCR6P51684 374 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 E2F1Q01094 437 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF267Q14586 743 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 TRIP6Q15654 476 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 VWA2Q5GFL6 755 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 GARNL3Q5VVW2 1013 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 HEPHL1Q6MZM0 1159 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ARL9Q6T311 187 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 LNX2Q8N448 690 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 SMIM4Q8WVI0 70 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 KAT2AQ92830 837 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 MCHR1Q99705 422 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 PPA2Q9H2U2 334 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 LYRM4Q9HD34 91 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 KLHL28Q9NXS3 571 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF224Q9NZL3 707 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 A0A1W2PPL8 197 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 DLL1O00548 723 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 HPXP02790 462 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 CSNK2A2P19784 350 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 MAOAP21397 527 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ZP3P21754 424 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 MPIP34949 423 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 MC3RP41968 323 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 GBX2P52951 348 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 RAB38P57729 211 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 RAB14P61106 215 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 RPS7P62081 194 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 PRR5P85299 388 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 INSM1Q01101 510 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ZFP36L1Q07352 338 aaKnown RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 FAM122CQ6P4D5 195 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ASCL5Q7RTU5 278 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 PPP1R3BQ86XI6 285 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 OR4K14Q8NGD5 310 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 GIMAP5Q96F15 307 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 KLHL15Q96M94 604 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 ERMAPQ96PL5 475 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 PRSS27Q9BQR3 290 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 OR52D1Q9H346 318 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 KRCC1Q9NPI7 259 aaPredicted RBP11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 NTNG1Q9Y2I2 539 aa11.58□□□□□ -0.56
RTFDC1-202ENST00000357348 SPAARA0A1B0GVQ0 90 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 UNC119BA6NIH7 251 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 OR6C65A6NJZ3 312 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 SLC22A31A6NKX4 558 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 PEX14O75381 377 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 RNH1P13489 461 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 ATF1P18846 271 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 LCN1P31025 176 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 SELENOPP49908 381 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 NRG3P56975 720 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 RGS8P57771 180 aaPredicted RBP11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF85Q03923 595 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 SNTB2Q13425 540 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 MAPK14Q16539 360 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 FAM69AQ5T7M9 428 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 C16orf62Q7Z3J2 963 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 C17orf47Q8NEP4 570 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 PTP4A1Q93096 173 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 ART5Q96L15 291 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 HCAR1Q9BXC0 346 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF304Q9HCX3 659 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 CMC2Q9NRP2 79 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 SIDT1Q9NXL6 827 aaKnown RBP11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 HAO2Q9NYQ3 351 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 SPATA2Q9UM82 520 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 KCNMB2Q9Y691 235 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 CEP250Q9BV73 2442 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 DCHS1Q96JQ0 3298 aa11.57□□□□□ -0.56
RTFDC1-202ENST00000357348 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 ZC3H12DA2A288 527 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 M0R233 179 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 EPXP11678 715 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 ZNF28P17035 718 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 SLC2A5P22732 501 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 CRYZQ08257 329 aaKnown RBP11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 ELFN2Q5R3F8 820 aa11.56□□□□□ -0.56
RTFDC1-202ENST00000357348 ARHGAP40Q5TG30 622 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms