RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TRBV5-5A0A0J9YX44 114 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 HIST1H1CP16403 213 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 STX4Q12846 297 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 PAN3Q58A45 887 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 CCDC36Q8IYA8 594 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 TMEM185AQ8NFB2 350 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 NMNAT2Q9BZQ4 307 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 A0A0B4J2E0 115 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 A0A1B0GX12 115 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 A0A1W2PRU2 124 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 FGF16O43320 207 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 PMS2P2O95744 297 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 STATHP02808 62 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 IFNA4P05014 189 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 HEXAP06865 529 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 NGFRP08138 427 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 AKR1D1P51857 326 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 SSBP1Q04837 148 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 GUCA2BQ16661 112 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 NDUFAF6Q330K2 333 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 ANKRD16Q6P6B7 361 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 CLEC1AQ8NC01 280 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR52E2Q8NGJ4 325 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR51S1Q8NGJ8 323 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 GLYATL2Q8WU03 294 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 TNFAIP8L1Q8WVP5 186 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 ZNF337Q9Y3M9 751 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 ZNF780BQ9Y6R6 833 aa11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-201ENST00000357276 A0A087WV48 116 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 RNF222A6NCQ9 220 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR6C74A6NCV1 312 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 IDSB3KWA1 339 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 TIMP1P01033 207 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 RLN1P04808 185 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 AKAIN1P0CW23 69 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 MANEAQ5SRI9 462 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 ZNF813Q6ZN06 617 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 BIVMQ86UB2 503 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 NRROSQ86YC3 692 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 ZNF768Q9H5H4 540 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 IL21RQ9HBE5 538 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 SPHK2Q9NRA0 654 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 YBX2Q9Y2T7 364 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 ARPC4-TTLL3A0A0A6YYG9 625 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 GGT3PA6NGU5 568 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 DISC1C4P0D8 188 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 PRICKLE3O43900 615 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 NTHL1P78549 312 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 LTBQ06643 244 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 IRF4Q15306 451 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 Q499Y3 187 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 SLC35D3Q5M8T2 416 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 TMEM88Q6PEY1 159 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 LINC00114Q6XXX2 140 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 PGAP1Q75T13 922 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR5M8Q8NGP6 311 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 TSNAXQ99598 290 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 ZNF230Q9UIE0 474 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 PCDHB10Q9UN67 800 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 MUC22E2RYF6 1773 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 SLC25A12O75746 678 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 RBM34P42696 430 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 LUMP51884 338 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 UBE2IP63279 158 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 FGL2Q14314 439 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 MLF2Q15773 248 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 FHL5Q5TD97 284 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 NKAIN2Q5VXU1 208 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 GLT8D1Q68CQ7 371 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 HAGHLQ6PII5 290 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 ERN2Q76MJ5 926 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR1S2Q8NGQ3 325 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 RBM18Q96H35 190 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 ZNF75AQ96N20 296 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 TSPAN10Q9H1Z9 355 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 SFXN1Q9H9B4 322 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 TRPV4Q9HBA0 871 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 TM7SF3Q9NS93 570 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 FLRT3Q9NZU0 649 aa11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 GPN3Q9UHW5 284 aaPredicted RBP11.06□□□□□ -0.64
SMARCAL1-201ENST00000357276 FNTBP49356 437 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 STARP49675 285 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 SNTB1Q13884 538 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 SLC39A11Q8N1S5 342 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 NPEPL1Q8NDH3 523 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR4K13Q8NH42 304 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 ARRDC3Q96B67 414 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 MRPL48Q96GC5 212 aaKnown RBP11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 TRBV5-7A0A0A0MS05 114 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 OR5H14A6NHG9 310 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 PEX12O00623 359 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 RAD1O60671 282 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 UPK3AO75631 287 aa11.05□□□□□ -0.64
SMARCAL1-201ENST00000357276 CTAG2O75638 210 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms