RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 GPR171O14626 319 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 SERPINI2O75830 405 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 SMNDC1O75940 238 aaKnown RBP eCLIP19.66■□□□□ 0.74
SHMT1-203ENST00000354098 TSPAN19P0C672 248 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF43P17038 809 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 UQCRC1P31930 480 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 RPL18Q07020 188 aaKnown RBP19.66■□□□□ 0.74
SHMT1-203ENST00000354098 ATP6AP1Q15904 470 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 EEF1A1P5Q5VTE0 462 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 C1orf94Q6P1W5 598 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 NHLRC1Q6VVB1 395 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 GALNT5Q7Z7M9 940 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 AMIGO2Q86SJ2 522 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 HS3ST5Q8IZT8 346 aa19.66■□□□□ 0.74
SHMT1-203ENST00000354098 OPN3Q9H1Y3 402 aaPredicted RBP19.66■□□□□ 0.74
SHMT1-203ENST00000354098 NOSIPQ9Y314 301 aaKnown RBP19.66■□□□□ 0.74
SHMT1-203ENST00000354098 INTS1Q8N201 2190 aaKnown RBP19.66■□□□□ 0.74
SHMT1-203ENST00000354098 EEF1E1-BLOC1S5C9J1V9 151 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 EEF1E1O43324 174 aaKnown RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 RNF13O43567 381 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 DEAF1O75398 565 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 E2F6O75461 281 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 GASTP01350 101 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 F13BP05160 661 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 POU2F1P14859 743 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 FASP25445 335 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 DNAJA1P31689 397 aaKnown RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 RPS4XP62701 263 aaKnown RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 POU3F1Q03052 451 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 ZP4Q12836 540 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 C1DQ13901 141 aaKnown RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 HMBOX1Q6NT76 420 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 LUZP2Q86TE4 346 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF610Q8N9Z0 462 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 TACO1Q9BSH4 297 aaKnown RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 KRCC1Q9NPI7 259 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 FANCFQ9NPI8 374 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 PLSCR4Q9NRQ2 329 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 PROCRQ9UNN8 238 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 HIF3AQ9Y2N7 669 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 MAGED1Q9Y5V3 778 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 TRAF3IP2O43734 574 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 CLDN14O95500 239 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 ZNF26P17031 533 aaPredicted RBP19.65■□□□□ 0.74
SHMT1-203ENST00000354098 PXKQ7Z7A4 578 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 UEVLDQ8IX04 471 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 TXNDC15Q96J42 360 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 JKAMPQ9P055 326 aa19.65■□□□□ 0.74
SHMT1-203ENST00000354098 PTP4A3O75365 173 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 PRKACGP22612 351 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 IFNGR2P38484 337 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 SLC9A3P48764 834 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 CLDN17P56750 224 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 SLC25A35Q3KQZ1 300 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 ZBED5Q49AG3 693 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 ZFP1Q6P2D0 407 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 WDFY1Q8IWB7 410 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 LINC00471Q8N535 108 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 AQP11Q8NBQ7 271 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 OR10G2Q8NGC3 310 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 GIPC3Q8TF64 312 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 SEMA6AQ9H2E6 1030 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 PIGMQ9H3S5 423 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 MCCC2Q9HCC0 563 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 S100A14Q9HCY8 104 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 MED29Q9NX70 200 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 PDP1Q9P0J1 537 aaPredicted RBP19.64■□□□□ 0.73
SHMT1-203ENST00000354098 SIGLEC7Q9Y286 467 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 NOX1Q9Y5S8 564 aa19.64■□□□□ 0.73
SHMT1-203ENST00000354098 UNC119BA6NIH7 251 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 MRPL33O75394 65 aaKnown RBP19.63■□□□□ 0.73
SHMT1-203ENST00000354098 CD8BP10966 210 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 FPR3P25089 353 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 GSSP48637 474 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 GK3PQ14409 553 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 ZNF474Q6S9Z5 364 aaPredicted RBP19.63■□□□□ 0.73
SHMT1-203ENST00000354098 IGFN1Q86VF2 1251 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 GNPDA2Q8TDQ7 276 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 TMEM45BQ96B21 275 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 PKP2Q99959 881 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 ENKD1Q9H0I2 346 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 KCNJ16Q9NPI9 418 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 PRSS50Q9UI38 385 aa19.63■□□□□ 0.73
SHMT1-203ENST00000354098 A8MXE2 369 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 IGHV3-9P01782 118 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 FCGR1AP12314 374 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 IFNGR1P15260 489 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 SELENOPP49908 381 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 FXYD6P3P58550 94 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 ALG10Q5BKT4 473 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 CASP12Q6UXS9 341 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 TFAP2EQ6VUC0 442 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 AAED1Q7RTV5 226 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 C10orf67Q8IYJ2 551 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 LRRC75AQ8NAA5 344 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 ANKK1Q8NFD2 765 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 GTPBP3Q969Y2 492 aaKnown RBP19.62■□□□□ 0.73
SHMT1-203ENST00000354098 FEVQ99581 238 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 EMC6Q9BV81 110 aa19.62■□□□□ 0.73
SHMT1-203ENST00000354098 DOPEY1Q5JWR5 2465 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms