RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PTNP21246 168 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 SLC9A3P48764 834 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 PCYT1AP49585 367 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 ARHGDIAP52565 204 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 HMGA2P52926 109 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 UGT2B15P54855 530 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 PRKCDQ05655 676 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 ZSCAN26Q16670 478 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 FBXL19-AS1Q494R0 122 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 IQCCQ4KMZ1 466 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 OR2T5Q6IEZ7 315 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 VWA1Q6PCB0 445 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 PODNL1Q6PEZ8 512 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 AAED1Q7RTV5 226 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 TSEN54Q7Z6J9 526 aaKnown RBP10.52□□□□□ -0.73
SNCA-202ENST00000345009 OAFQ86UD1 273 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 LIX1LQ8IVB5 337 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 ADGRG5Q8IZF4 528 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 OR2T29Q8NH02 315 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 SLC7A13Q8TCU3 470 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 LIPHQ8WWY8 451 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 RNASE6Q93091 150 aaKnown RBP10.52□□□□□ -0.73
SNCA-202ENST00000345009 APH1AQ96BI3 265 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 DHRS1Q96LJ7 313 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 RBM24Q9BX46 236 aaKnown RBP10.52□□□□□ -0.73
SNCA-202ENST00000345009 UCK2Q9BZX2 261 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 CCM2LQ9NUG4 571 aaPredicted RBP10.52□□□□□ -0.73
SNCA-202ENST00000345009 JKAMPQ9P055 326 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 FLVCR1Q9Y5Y0 555 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 PTPN13Q12923 2485 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 FLNBO75369 2602 aaKnown RBP10.51□□□□□ -0.73
SNCA-202ENST00000345009 NKX2-6A6NCS4 301 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 ZNF726A6NNF4 738 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 A8MXE2 369 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 PRSS44E7EML9 344 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 RNF13O43567 381 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 OR10H3O60404 316 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 KRT33AO76009 404 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 ASAH2BP0C7U1 165 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 FCGR1AP12314 374 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 UQCRC1P31930 480 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 OR3A2P47893 321 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 LTBQ06643 244 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 ZP4Q12836 540 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 P2RY6Q15077 328 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 CASP12Q6UXS9 341 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 TMPRSS11FQ6ZWK6 438 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 CREB3L2Q70SY1 520 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 HDDC2Q7Z4H3 204 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 ABHD12BQ7Z5M8 362 aaPredicted RBP10.51□□□□□ -0.73
SNCA-202ENST00000345009 LUZP2Q86TE4 346 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 UBE2J2Q8N2K1 259 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 ZNF610Q8N9Z0 462 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 OR4K5Q8NGD3 323 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 PFN4Q8NHR9 129 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 TMEM45BQ96B21 275 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 HDHD5Q9BXW7 423 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 C20orf141Q9NUB4 165 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 STX18Q9P2W9 335 aaKnown RBP10.51□□□□□ -0.73
SNCA-202ENST00000345009 UPB1Q9UBR1 384 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 RCE1Q9Y256 329 aa10.51□□□□□ -0.73
SNCA-202ENST00000345009 SAMHD1Q9Y3Z3 626 aaKnown RBP10.51□□□□□ -0.73
SNCA-202ENST00000345009 ANKHD1Q8IWZ3 2542 aaKnown RBP10.51□□□□□ -0.73
SNCA-202ENST00000345009 CENPEQ02224 2701 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 TRBV4-1A0A0J9YWV2 114 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 A0A1W2PRG6 482 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 SH3PXD2BA1X283 911 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 ZNF814B7Z6K7 855 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 MS4A18H0YCH9 400 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 HNRNPRO43390 633 aaKnown RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 RAMP1O60894 148 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 FKBP6O75344 327 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 DEAF1O75398 565 aaPredicted RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 E2F6O75461 281 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 CGAP01215 116 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 POU2F1P14859 743 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 KLK2P20151 261 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 P2RY4P51582 365 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 PRPS1P60891 318 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 EXOC3L2Q2M3D2 409 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 MS4A18Q3C1V0 323 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 TBPL2Q6SJ96 375 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 TFAP2EQ6VUC0 442 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 NUFIP2Q7Z417 695 aaKnown RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 KDM8Q8N371 416 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 LRRC17Q8N6Y2 441 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 POMGNT2Q8NAT1 580 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 RELL2Q8NC24 303 aaPredicted RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 PAPD5Q8NDF8 572 aaKnown RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 ADAD1Q96M93 576 aaKnown RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 PSMG3-AS1Q96PY0 264 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 OPN3Q9H1Y3 402 aaPredicted RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 DNAJB9Q9UBS3 223 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 ING1Q9UK53 422 aaPredicted RBP10.5□□□□□ -0.73
SNCA-202ENST00000345009 AP4S1Q9Y587 144 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 ALPK2Q86TB3 2170 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
SNCA-202ENST00000345009 PKDREJQ9NTG1 2253 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms