RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 TMEM43Q9BTV4 400 aa7□□□□□ -1.29
HIPK1-201ENST00000340480 MED18Q9BUE0 208 aa7□□□□□ -1.29
HIPK1-201ENST00000340480 POTEKPQ9BYX7 375 aa7□□□□□ -1.29
HIPK1-201ENST00000340480 ERVMER34-1Q9H9K5 563 aa7□□□□□ -1.29
HIPK1-201ENST00000340480 CAMK2AQ9UQM7 478 aa7□□□□□ -1.29
HIPK1-201ENST00000340480 DOCK4Q8N1I0 1966 aa7□□□□□ -1.29
HIPK1-201ENST00000340480 TRAV27A0A087WT01 109 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CCDC163A0A0D9SF12 145 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 LOC102725191A0A1B0GVB3 256 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PCSK6P29122 969 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZNF92Q03936 586 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 EEF1A2Q05639 463 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 SPATC1Q76KD6 591 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 DND1Q8IYX4 353 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 DYNC2LI1Q8TCX1 351 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RRNAD1Q96FB5 475 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 TNFRSF13CQ96RJ3 184 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZNF587Q96SQ5 575 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CHST8Q9H2A9 424 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PRMT8Q9NR22 394 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 C2orf42Q9NWW7 574 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 MALT1Q9UDY8 824 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ARPC4-TTLL3A0A0A6YYG9 625 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZSCAN5BA6NJL1 495 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ARPC3O15145 178 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 LGALS4P56470 323 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ERVK-25P63136 954 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 DBPQ10586 325 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CRMP1Q14194 572 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RBM39Q14498 530 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RSU1Q15404 277 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 HEPHL1Q6MZM0 1159 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 UTS2BQ765I0 119 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 BCORP1Q8N888 145 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 SDR9C7Q8NEX9 313 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 C16orf52Q8NHV5 167 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PRRX2Q99811 253 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 TXNL4BQ9NX01 149 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RNF215Q9Y6U7 377 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CD8B2A6NJW9 211 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 KDM4EB2RXH2 506 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 GLCEO94923 617 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 IGLV3-19P01714 112 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RAB40ALP0C0E4 278 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 LINC00271P0C7V0 271 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CD8BP10966 210 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 VAMP1P23763 118 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 P2RX1P51575 399 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 MVDP53602 400 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 SF3A2Q15428 464 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ACSM3Q53FZ2 586 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PHC2Q8IXK0 858 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 NLGN4XQ8N0W4 816 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RAB40AQ8WXH6 277 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RPL3LQ92901 407 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 FOXRED1Q96CU9 486 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PHB2Q99623 299 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CHRNA10Q9GZZ6 450 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 RAB33BQ9H082 229 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ERVK13-1Q9NX77 482 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 GON4LQ3T8J9 2241 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 NOTOA8MTQ0 251 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 GABRPO00591 440 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PPM1DO15297 605 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 SBK2P0C263 348 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 IL3RAP26951 378 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ART1P52961 327 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ACTBP60709 375 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ACTG1P63261 375 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 MESP2Q0VG99 397 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 NIPAL3Q6P499 406 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CNEP1R1Q8N9A8 125 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 TM4SF19Q96DZ7 209 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZNF681Q96N22 645 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 OR5M11Q96RB7 305 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 KATNB1Q9BVA0 655 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 TWSG1Q9GZX9 223 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 EXOSC3Q9NQT5 275 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZFP57Q9NU63 452 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 HIF3AQ9Y2N7 669 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 NSG1A0A0A6YYJ2 146 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 SEMG1P04279 462 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 TP53P04637 393 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 APOBEC1P41238 236 aaKnown RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 POU3F4P49335 361 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CDK5Q00535 292 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZNF141Q15928 474 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 PRTGQ2VWP7 1150 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 OR4F15Q8NGB8 312 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 FCAMRQ8WWV6 532 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 CCDC74AQ96AQ1 378 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 ZNF701Q9NV72 531 aaPredicted RBP6.99□□□□□ -1.29
HIPK1-201ENST00000340480 HAO2Q9NYQ3 351 aa6.99□□□□□ -1.29
HIPK1-201ENST00000340480 P2RX6O15547 441 aa6.98□□□□□ -1.29
HIPK1-201ENST00000340480 CD79AP11912 226 aa6.98□□□□□ -1.29
HIPK1-201ENST00000340480 CPEP16870 476 aa6.98□□□□□ -1.29
HIPK1-201ENST00000340480 MAOAP21397 527 aa6.98□□□□□ -1.29
HIPK1-201ENST00000340480 PCBD1P61457 104 aa6.98□□□□□ -1.29
HIPK1-201ENST00000340480 SIRPAP78324 504 aa6.98□□□□□ -1.29
HIPK1-201ENST00000340480 XAF1Q6GPH4 301 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms