RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 IFNA21P01568 189 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 NAGAP17050 411 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 GNRHRP30968 328 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 RNPS1Q15287 305 aaKnown RBP11.72□□□□□ -0.53
LIN54-201ENST00000340417 CD163Q86VB7 1156 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 IL17RDQ8NFM7 739 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 ALG8Q9BVK2 526 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 C14orf119Q9NWQ9 140 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 MEMO1Q9Y316 297 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 A0A1W2PR77 199 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 PRAMEF4O60810 478 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 PITPNBP48739 271 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 PRAMEF9Q5VWM5 478 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 LYPD8Q6UX82 237 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 PLPP5Q8NEB5 264 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 MFSD8Q8NHS3 518 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 COG8Q96MW5 612 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 TUBB1Q9H4B7 451 aa11.72□□□□□ -0.53
LIN54-201ENST00000340417 FUOMA2VDF0 154 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 CD8B2A6NJW9 211 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 SGCEO43556 437 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 RGS9O75916 674 aaPredicted RBP11.71□□□□□ -0.53
LIN54-201ENST00000340417 GRPP07492 148 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 CD8BP10966 210 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 AMY2BP19961 511 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 OGFOD3Q6PK18 319 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ZNF367Q7RTV3 350 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 OR5AS1Q8N127 324 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 GPR148Q8TDV2 347 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 MUS81Q96NY9 551 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 MEGF11A6BM72 1044 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 FAM183AA6NL82 134 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 VGLL3A8MV65 326 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ATP1B1P05026 303 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 QDPRP09417 244 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 DPY19L2P2Q6ZN68 376 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 LINC00346Q8IVM7 164 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ZFP41Q8N8Y5 198 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ZNF675Q8TD23 568 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 CCDC120Q96HB5 630 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ZC3H10Q96K80 434 aaKnown RBP11.71□□□□□ -0.53
LIN54-201ENST00000340417 PRR14Q9BWN1 585 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 SEC14L4Q9UDX3 406 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 TRBV4-1A0A0J9YWV2 114 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 DISC1C4P0D8 188 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 H0YAE9 185 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 HMGN4O00479 90 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 IGHA2P01877 340 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 GNB2P62879 340 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ESPNLQ6ZVH7 1005 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 FAM109AQ8N4B1 249 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 NEIL3Q8TAT5 605 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
LIN54-201ENST00000340417 EGLN3Q9H6Z9 239 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 RAXQ9Y2V3 346 aa11.71□□□□□ -0.53
LIN54-201ENST00000340417 K7ESF4 209 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 CD14P08571 375 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 CBLBQ13191 982 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 DUSP8Q13202 625 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 C16orf47Q6ZP98 133 aaPredicted RBP11.71□□□□□ -0.54
LIN54-201ENST00000340417 VN1R4Q7Z5H5 301 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 MS4A15Q8N5U1 240 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 TRUB1Q8WWH5 349 aaKnown RBP11.71□□□□□ -0.54
LIN54-201ENST00000340417 C1QTNF3Q9BXJ4 246 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.54
LIN54-201ENST00000340417 PRR19A6NJB7 356 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 MT-ND2P03891 347 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 OR8G3PP0DMU2 310 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 CD40LGP29965 261 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 PSMB10P40306 273 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 MAGEA2P43356 314 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 ZNF628Q5EBL2 1059 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 OR6T1Q8NGN1 323 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 SYT4Q9H2B2 425 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.54
LIN54-201ENST00000340417 MOKQ9UQ07 419 aa11.71□□□□□ -0.54
LIN54-201ENST00000340417 RAB40ALP0C0E4 278 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 RPL27P61353 136 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 KLRB1Q12918 225 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 HHLA2Q9UM44 414 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 TIMM10BQ9Y5J6 103 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 RP1L1Q8IWN7 2480 aaPredicted RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 OR6C70A6NIJ9 312 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 XPNPEP2O43895 674 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 XKR7Q5GH72 579 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 MEPCEQ7L2J0 689 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 HSD17B8Q92506 261 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 ZNF501Q96CX3 271 aaPredicted RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 TRMT61AQ96FX7 289 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 OR10A4Q9H209 315 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 SLC22A11Q9NSA0 550 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 ELK4P28324 431 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 TEKQ02763 1124 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 OR8G1Q15617 311 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 EIF2S3LQ2VIR3 472 aaKnown RBP11.7□□□□□ -0.54
LIN54-201ENST00000340417 ESCO2Q56NI9 601 aa11.7□□□□□ -0.54
LIN54-201ENST00000340417 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms