RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 TP53I11O14683 189 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 CCL3P10147 92 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 TFPIP10646 304 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 ACSM1Q08AH1 577 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 OR7A5Q15622 319 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 PLPPR5Q32ZL2 321 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 GLYR1Q49A26 553 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 LINC01590Q5TEZ4 76 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF468Q5VIY5 522 aaPredicted RBP20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 TMEM156Q8N614 296 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 OR2M3Q8NG83 312 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 SYT4Q9H2B2 425 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 INPP5EQ9NRR6 644 aa20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 CCDC59Q9P031 241 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-203ENST00000339162 CCDC187A0A096LP49 1063 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 FTCDNL1E5RQL4 147 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 CDRT1O95170 752 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 TXNDC12O95881 172 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 CLEC2LP0C7M8 214 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 SSR4P51571 173 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 TP53I3Q53FA7 332 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 OPN5Q6U736 354 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 SLC35F2Q8IXU6 374 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 POC1BQ8TC44 478 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 BARHL1Q9BZE3 327 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 MMP27Q9H306 513 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 INIPQ9NRY2 104 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 COPS3Q9UNS2 423 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 GRIP1Q9Y3R0 1128 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 MED12Q93074 2177 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 PLPP3O14495 311 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 DVL2O14641 736 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 OR6A2O95222 327 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 MT-ND5P03915 603 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 HLA-DOBP13765 273 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 MSX1P28360 303 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 C19orf57Q0VDD7 668 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 GGTLC2Q14390 218 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 TRIP6Q15654 476 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 ACKR1Q16570 336 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 LCN1P1Q5VSP4 162 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 B3GNTL1Q67FW5 361 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 C16orf87Q6PH81 154 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 MARCH9Q86YJ5 346 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 PM20D2Q8IYS1 436 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 OR6V1Q8N148 313 aa20.23■□□□□ 0.83
PDLIM2-203ENST00000339162 OR2T1O43869 369 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 DXOO77932 396 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 GLCEO94923 617 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 GPANK1O95872 356 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 IGHEP01854 428 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 RPS15P62841 145 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 ACTC1P68032 377 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 ACTA1P68133 377 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 INAQ16352 499 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 TMEM164Q5U3C3 297 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 SNX29P2Q8IUI4 249 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 EXD3Q8N9H8 876 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 POMGNT2Q8NAT1 580 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 NLGN4YQ8NFZ3 816 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 OR4K17Q8NGC6 315 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 HMG20AQ9NP66 347 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 PCDHGB6Q9Y5F9 930 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 MRPS18BQ9Y676 258 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 IGLV3-32A0A0A0MS00 114 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 CD8B2A6NJW9 211 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 PSMD9O00233 223 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 CD8BP10966 210 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 SOX6P35712 828 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 ACVR1BP36896 505 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 MLF1P58340 268 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 SSPNQ14714 243 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 SLC35D3Q5M8T2 416 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 OTPQ5XKR4 325 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 MFSD4AQ8N468 514 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 DACH2Q96NX9 599 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 NDEL1Q9GZM8 345 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 NXF2Q9GZY0 626 aaKnown RBP20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 MARCH7Q9H992 704 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 TRIM36Q9NQ86 728 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 GALNT8Q9NY28 637 aa20.22■□□□□ 0.83
PDLIM2-203ENST00000339162 TVP23AA6NH52 213 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 CD63P08962 238 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 OR2T7P0C7T2 308 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 SDC2P34741 201 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 MELKQ14680 651 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 EMC4Q5J8M3 183 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 ARL9Q6T311 187 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 VASH1Q7L8A9 365 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 ARIH2OSQ8N7S6 290 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 OR2T27Q8NH04 317 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 FOXN4Q96NZ1 517 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 NUAK2Q9H093 628 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 PCSK5Q92824 1860 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 RAB40ALP0C0E4 278 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 IMPDH2P12268 514 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 DLSTP36957 453 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 IL10RAQ13651 578 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF846Q147U1 533 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 TBC1D25Q3MII6 688 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms