RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MIB2Q96AX9 1013 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NMNAT3Q96T66 252 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CNOT2Q9NZN8 540 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TRAPPC4Q9Y296 219 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ACACAQ13085 2346 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 URB1O60287 2271 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 A0A0J9YW62 118 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GJE1A6NN92 205 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RRP8O43159 456 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FZD7O75084 574 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CLUP10909 449 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PAICSP22234 425 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CDKN2AP42771 156 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 STARP49675 285 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NEDD8Q15843 81 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KLHL12Q53G59 568 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NPEPL1Q8NDH3 523 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ZPLD1Q8TCW7 415 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RFKQ969G6 155 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RNFT2Q96EX2 444 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KLHL15Q96M94 604 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 OR51V1Q9H2C8 321 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 B3GALT5Q9Y2C3 310 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KIAA1549Q9HCM3 1950 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ALPK2Q86TB3 2170 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 H0YC42 278 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TNFSF11O14788 317 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MRPS14O60783 128 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PMS2P2O95744 297 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FADS2O95864 444 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TXNDC12O95881 172 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GYPBP06028 91 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ADRB1P08588 477 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ADRA2AP08913 450 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PIPP12273 146 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MAP2K4P45985 399 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MTNR1AP48039 350 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GFRA1P56159 465 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CLDN20P56880 219 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC35A1P78382 337 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 EMX1Q04741 257 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ACKR1Q16570 336 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 HYAL4Q2M3T9 481 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NADK2Q4G0N4 442 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MESTQ5EB52 335 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GPR139Q6DWJ6 353 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NIPAL3Q6P499 406 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 B3GLCTQ6Y288 498 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MEPCEQ7L2J0 689 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SATL1Q86VE3 508 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 JAZF1Q86VZ6 243 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GID4Q8IVV7 300 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FAM122AQ96E09 287 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DDOQ99489 341 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 COMMD3-BMI1R4GMX3 469 aa13.23□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TRAV17A0A0B4J275 112 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 A0A1W2PRG6 482 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 OR6C68A6NDL8 312 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 A6NHS1 94 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ZNF814B7Z6K7 855 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SEC14L5O43304 696 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 APOL3O95236 402 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KLK2P20151 261 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 POU3F2P20265 443 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PCMT1P22061 227 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 HTR1FP30939 366 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ALDH3B2P48448 385 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC16A1P53985 500 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RPL27P61353 136 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 EMC4Q5J8M3 183 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GTF2IRD2BQ6EKJ0 949 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 XAF1Q6GPH4 301 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GTF2IRD2Q86UP8 949 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC22A16Q86VW1 577 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 UBQLNLQ8IYU4 475 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TMIGD2Q96BF3 282 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 LGALS12Q96DT0 336 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC6A15Q9H2J7 730 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TXNIPQ9H3M7 391 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PIEZO1Q92508 2521 aa13.22□□□□□ -0.29
CDK5RAP3-201ENST00000338399 H7C1C5 153 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 EIF1AYO14602 144 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC2A5P22732 501 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ACVR1BP36896 505 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 P2RY4P51582 365 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SUCLG1P53597 346 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RPS7P62081 194 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 LCN6P62502 163 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PMP22Q01453 160 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 POU3F1Q03052 451 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MELKQ14680 651 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KLHL22Q53GT1 634 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SHFQ7M4L6 423 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GGNQ86UU5 652 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms