RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 FTCDNL1E5RQL4 147 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 LY6HO94772 140 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 OR4A8P0C604 315 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 BMP2P12643 396 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 SLC6A2P23975 617 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 ARR3P36575 388 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 CAPZA2P47755 286 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 GZMKP49863 264 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 P2RY4P51582 365 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 TUBA1BP68363 451 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 TUBA4AP68366 448 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 ARF1P84077 181 aaKnown RBP9.28□□□□□ -0.92
CAPN3-202ENST00000337571 CDK6Q00534 326 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 NAAAQ02083 359 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 EGR4Q05215 589 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 GGTLC2Q14390 218 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 MFSD13AQ14CX5 517 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 MST1LQ2TV78 715 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 IQCCQ4KMZ1 466 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 GCNT6Q5T4J0 391 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 FAM69AQ5T7M9 428 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 TUBA1AQ71U36 451 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 H1FNTQ75WM6 255 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-202ENST00000337571 MAVSQ7Z434 540 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 CCDC36Q8IYA8 594 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 FAM169BQ8N8A8 192 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 LSMEM1Q8N8F7 131 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 IL17RDQ8NFM7 739 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 NFKBIDQ8NI38 313 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 NANOS1Q8WY41 292 aaKnown RBP9.28□□□□□ -0.92
CAPN3-202ENST00000337571 TAAR8Q969N4 342 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 TLCD1Q96CP7 247 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 SPDL1Q96EA4 605 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 KTI12Q96EK9 354 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-202ENST00000337571 SLC47A1Q96FL8 570 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 ANKRD27Q96NW4 1050 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 EPYCQ99645 322 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 CRLF2Q9HC73 371 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 MYOZ1Q9NP98 299 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-202ENST00000337571 CCDC167Q9P0B6 97 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 CHST2Q9Y4C5 530 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 YLPM1P49750 1951 aaKnown RBP9.28□□□□□ -0.92
CAPN3-202ENST00000337571 ABCA1O95477 2261 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 ALPK2Q86TB3 2170 aa9.27□□□□□ -0.92
CAPN3-202ENST00000337571 RTTNQ86VV8 2226 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 LOC102725191A0A1B0GVB3 256 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 M0R082 166 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 LMX1BO60663 402 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 PDE5AO76074 875 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 CECR9P0C854 216 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 CBR1P16152 277 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 NPR2P20594 1047 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 CBLP22681 906 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 GRPRP30550 384 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 NR4A2P43354 598 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 IDH3AP50213 366 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 FAM91A1Q658Y4 838 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 FAM166AQ6J272 317 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 C6orf89Q6UWU4 347 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 LINGO2Q7L985 606 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 LSRQ86X29 649 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-202ENST00000337571 SNX32Q86XE0 403 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 UEVLDQ8IX04 471 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 C10orf53Q8N6V4 93 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 FOXN4Q96NZ1 517 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-202ENST00000337571 CCDC28BQ9BUN5 200 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 PTDSS2Q9BVG9 487 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 ASPNQ9BXN1 380 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 GPR35Q9HC97 309 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 B3GAT2Q9NPZ5 323 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 TMEM160Q9NX00 188 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-202ENST00000337571 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-202ENST00000337571 KCNS2Q9ULS6 477 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 SPEF1Q9Y4P9 236 aa9.27□□□□□ -0.93
CAPN3-202ENST00000337571 CUBNO60494 3623 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 A0A096LNT2 108 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 LOC100289279A0A1B0GTE1 492 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 A0A1B0GWA3 101 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 M0R3G1 203 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF432O94892 652 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 OR6A2O95222 327 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 IGKV3-15P01624 115 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 APEHP13798 732 aaKnown RBP9.26□□□□□ -0.93
CAPN3-202ENST00000337571 HNF1AP20823 631 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 IDH3GP51553 393 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-202ENST00000337571 RGS8P57771 180 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-202ENST00000337571 NPRL3Q12980 569 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 PMS2P3Q13401 168 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 SCARB2Q14108 478 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 EFNB3Q15768 340 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 ADIPOQQ15848 244 aa9.26□□□□□ -0.93
CAPN3-202ENST00000337571 CEACAM16Q2WEN9 425 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms