RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 GCNT2Q8N0V5 402 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 ZPLD1Q8TCW7 415 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 GNPDA2Q8TDQ7 276 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 UBE2FQ969M7 185 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 WBP1Q96G27 269 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 UCK2Q9BZX2 261 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 TOR3AQ9H497 397 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 RIBC2Q9H4K1 309 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 KRT84Q9NSB2 600 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 UBAP1Q9NZ09 502 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 HDGFL3Q9Y3E1 203 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 SLC2A10O95528 541 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 ADAP00813 363 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 ADORA3P0DMS8 318 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 SFTPCP11686 197 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 CDH2P19022 906 aaPredicted RBP14.73□□□□□ -0.05
SHOX-201ENST00000334060 TTKP33981 857 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 ALDH3A2P51648 485 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 RUNX1T1Q06455 604 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 SGCBQ16585 318 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 ZNF843Q8N446 348 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 C9orf106Q8NAJ2 232 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 NAXEQ8NCW5 288 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 FANK1Q8TC84 345 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 NRBF2Q96F24 287 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 ZNF385AQ96PM9 386 aaKnown RBP14.73□□□□□ -0.05
SHOX-201ENST00000334060 C9orf16Q9BUW7 83 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 EMC6Q9BV81 110 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 FKRPQ9H9S5 495 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 HHATLQ9HCP6 504 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 MGAT4BQ9UQ53 548 aa14.73□□□□□ -0.05
SHOX-201ENST00000334060 SPIN1Q9Y657 262 aaPredicted RBP14.73□□□□□ -0.05
SHOX-201ENST00000334060 ARRDC5A6NEK1 342 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 SLC19A2O60779 497 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 PPP1R3DO95685 299 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 HOXB6P17509 224 aaKnown RBP14.72□□□□□ -0.05
SHOX-201ENST00000334060 ERVK-25P63136 954 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 TLE1Q04724 770 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 PMS2P3Q13401 168 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 TOP3AQ13472 1001 aaPredicted RBP14.72□□□□□ -0.05
SHOX-201ENST00000334060 ACSF3Q4G176 576 aaPredicted RBP14.72□□□□□ -0.05
SHOX-201ENST00000334060 ACSM5Q6NUN0 579 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 NHLRC1Q6VVB1 395 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 NANOGNBQ7Z5D8 188 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 ADGRE4PQ86SQ3 457 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 DOLPP1Q86YN1 238 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 MED12LQ86YW9 2145 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 OR5J2Q8NH18 312 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 TAPBPLQ9BX59 468 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 CHST11Q9NPF2 352 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 TBC1D23Q9NUY8 699 aa14.72□□□□□ -0.05
SHOX-201ENST00000334060 POLEQ07864 2286 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 H7C1C5 153 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 TSPAN19P0C672 248 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 ABOP16442 354 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 ARHGDIAP52565 204 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 RAC3P60763 192 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 LCN6P62502 163 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 FOXF2Q12947 444 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 GK3PQ14409 553 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 ZBED5Q49AG3 693 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 SLC35F1Q5T1Q4 408 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 MAMDC2Q7Z304 686 aaPredicted RBP14.71□□□□□ -0.05
SHOX-201ENST00000334060 MEIOBQ8N635 442 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 LIPHQ8WWY8 451 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 RASD2Q96D21 266 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 USE1Q9NZ43 259 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 CLCF1Q9UBD9 225 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 ZNF229Q9UJW7 825 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 HIF3AQ9Y2N7 669 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 PCDHGB5Q9Y5G0 923 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 CEPT1Q9Y6K0 416 aa14.71□□□□□ -0.05
SHOX-201ENST00000334060 AQP7P3A6NL99 342 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 ZNF716A6NP11 495 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 H3BN98 237 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 FZD7O75084 574 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 GNAO1P09471 354 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 ANXA8P13928 327 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 POU3F1Q03052 451 aaPredicted RBP14.71□□□□□ -0.06
SHOX-201ENST00000334060 OTPQ5XKR4 325 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 H1FNTQ75WM6 255 aaPredicted RBP14.71□□□□□ -0.06
SHOX-201ENST00000334060 FCRLAQ7L513 359 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 BCDIN3DQ7Z5W3 292 aaKnown RBP14.71□□□□□ -0.06
SHOX-201ENST00000334060 ZIC4Q8N9L1 334 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 FAM57AQ8TBR7 257 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 SARAFQ96BY9 339 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 COX4I2Q96KJ9 171 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 RBM4BQ9BQ04 359 aaKnown RBP14.71□□□□□ -0.06
SHOX-201ENST00000334060 KATNB1Q9BVA0 655 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 RBM4Q9BWF3 364 aaKnown RBP14.71□□□□□ -0.06
SHOX-201ENST00000334060 MRPL39Q9NYK5 338 aaKnown RBP14.71□□□□□ -0.06
SHOX-201ENST00000334060 TRAPPC4Q9Y296 219 aa14.71□□□□□ -0.06
SHOX-201ENST00000334060 ADGRG4Q8IZF6 3080 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 ALDH3B2P48448 385 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 BCL2A1Q16548 175 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 KRTCAP3Q53RY4 240 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 C6orf52Q5T4I8 152 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 SMARCD3Q6STE5 483 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 PAQR6Q6TCH4 344 aa14.7□□□□□ -0.06
SHOX-201ENST00000334060 RASSF6Q6ZTQ3 369 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms