RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 C8orf89P0DMQ9 161 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 MUC1P15941 1255 aaPredicted RBP16.71■□□□□ 0.27
SOCS3-201ENST00000330871 FRKP42685 505 aaPredicted RBP16.71■□□□□ 0.27
SOCS3-201ENST00000330871 ATP1B3P54709 279 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 RNF212Q495C1 297 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 ASTLQ6HA08 431 aaPredicted RBP16.71■□□□□ 0.27
SOCS3-201ENST00000330871 ZNF813Q6ZN06 617 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 GAREM2Q75VX8 874 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 OR13C2Q8NGS9 318 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 CD180Q99467 661 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 UNC80Q8N2C7 3258 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 TRAV27A0A087WT01 109 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 CD3DP04234 171 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 OR4E1P0C645 316 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 MRPS10P82664 201 aaKnown RBP16.71■□□□□ 0.27
SOCS3-201ENST00000330871 DBX2Q6ZNG2 339 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 DMRTC2Q8IXT2 367 aaPredicted RBP16.71■□□□□ 0.27
SOCS3-201ENST00000330871 OR51A7Q8NH64 312 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 CD99L2Q8TCZ2 262 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 COMMD9Q9P000 198 aa16.71■□□□□ 0.27
SOCS3-201ENST00000330871 TET1Q8NFU7 2136 aa16.71■□□□□ 0.26
SOCS3-201ENST00000330871 LRRC72A6NJI9 287 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 H3BSH0 61 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
SOCS3-201ENST00000330871 CASRP41180 1078 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 F2RL1P55085 397 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 ZNF658BQ4V348 819 aaPredicted RBP16.7■□□□□ 0.26
SOCS3-201ENST00000330871 LIN54Q6MZP7 749 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 SLC29A4Q7RTT9 530 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 NUBPLQ8TB37 319 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 SNX33Q8WV41 574 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 HS6ST2Q96MM7 605 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 EPHX3Q9H6B9 360 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 RNF122Q9H9V4 155 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 LHX9Q9NQ69 397 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 CMC2Q9NRP2 79 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 H7C417 338 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 LEFTY2O00292 366 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 GLSO94925 669 aaPredicted RBP16.7■□□□□ 0.26
SOCS3-201ENST00000330871 FOLR2P14207 255 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 ZNF14P17017 642 aaPredicted RBP16.7■□□□□ 0.26
SOCS3-201ENST00000330871 TGM3Q08188 693 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 FNDC3BQ53EP0 1204 aaKnown RBP16.7■□□□□ 0.26
SOCS3-201ENST00000330871 WDR88Q6ZMY6 472 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 CCDC116Q8IYX3 515 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 GJD3Q8N144 294 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 LNX2Q8N448 690 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 PPP1R1CQ8WVI7 109 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 C3orf49Q96BT1 292 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 RHOVQ96L33 236 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 TCEAL7Q9BRU2 100 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 LAT2Q9GZY6 243 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 TSPAN10Q9H1Z9 355 aaPredicted RBP16.7■□□□□ 0.26
SOCS3-201ENST00000330871 MTFP1Q9UDX5 166 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 PLXNA2O75051 1894 aa16.7■□□□□ 0.26
SOCS3-201ENST00000330871 A0A1W2PQ45 241 aaPredicted RBP16.69■□□□□ 0.26
SOCS3-201ENST00000330871 A0A1W2PQY0 241 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 RAB40ALP0C0E4 278 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 HSD17B2P37059 387 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 MNDAP41218 407 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 DEFA6Q01524 100 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 ZNF345Q14585 488 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 ELAVL1Q15717 326 aaKnown RBP16.69■□□□□ 0.26
SOCS3-201ENST00000330871 OR52W1Q6IF63 320 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 ACOT7LQ6ZUV0 252 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 TMEM200AQ86VY9 491 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 RAB40AQ8WXH6 277 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 HIST1H2BAQ96A08 127 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 MIB2Q96AX9 1013 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 TRIM43Q96BQ3 446 aaPredicted RBP16.69■□□□□ 0.26
SOCS3-201ENST00000330871 GPR174Q9BXC1 333 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 A0A0A6YYC8 382 aaPredicted RBP16.69■□□□□ 0.26
SOCS3-201ENST00000330871 I3L1I5 382 aaPredicted RBP16.69■□□□□ 0.26
SOCS3-201ENST00000330871 IMPA2O14732 288 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 CTNSO60931 367 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 ZIC2O95409 532 aaPredicted RBP16.69■□□□□ 0.26
SOCS3-201ENST00000330871 OR8U8P0C7N1 319 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 DUSP2Q05923 314 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 PRAMEF14Q5SWL7 426 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 FIGNL1Q6PIW4 674 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 FAM129CQ86XR2 697 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 OR1J2Q8NGS2 313 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 TMED6Q8WW62 240 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 HRH4Q9H3N8 390 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 SDHAF3Q9NRP4 125 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 FGF16O43320 207 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 GKN3PP0CG01 181 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 CPT2P23786 658 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 KLHL26Q53HC5 615 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 MYLIPQ8WY64 445 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 OR7D2Q96RA2 312 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 NRIP2Q9BQI9 281 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 KLHL28Q9NXS3 571 aa16.69■□□□□ 0.26
SOCS3-201ENST00000330871 SPTBP11277 2137 aa16.68■□□□□ 0.26
SOCS3-201ENST00000330871 RIIAD1A6NNX1 92 aa16.68■□□□□ 0.26
SOCS3-201ENST00000330871 SULT2B1O00204 365 aa16.68■□□□□ 0.26
SOCS3-201ENST00000330871 CD8AP01732 235 aa16.68■□□□□ 0.26
SOCS3-201ENST00000330871 ELFN1P0C7U0 828 aa16.68■□□□□ 0.26
SOCS3-201ENST00000330871 SLC2A5P22732 501 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms