RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KDELR2P33947 212 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 ZNF83P51522 516 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 FOXD4Q12950 439 aaPredicted RBP24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 MS4A18Q3C1V0 323 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 KLHL24Q6TFL4 600 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 ANKS4BQ8N8V4 417 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 WFDC11Q8NEX6 87 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 IGFBPL1Q8WX77 278 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 BOD1Q96IK1 185 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 ALKBH3Q96Q83 286 aaPredicted RBP24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 LRRC37BQ96QE4 947 aa24.23■■□□□ 1.47
ATPAF1-201ENST00000329231 SHOX2O60902 331 aaPredicted RBP24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 UPK3AO75631 287 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 THY1P04216 161 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 NUDT2P50583 147 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 PRPS1P60891 318 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 LGALS3BPQ08380 585 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 LRRC23Q53EV4 343 aaPredicted RBP24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 CYBRD1Q53TN4 286 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 HMBOX1Q6NT76 420 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 WDR88Q6ZMY6 472 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 SLC15A3Q8IY34 581 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 NEUROG1Q92886 237 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 SLC19A3Q9BZV2 496 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 POLR2J2Q9GZM3 115 aaKnown RBP24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 POLR2J3Q9H1A7 115 aaKnown RBP24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 ADAM21Q9UKJ8 722 aa24.22■■□□□ 1.47
ATPAF1-201ENST00000329231 TRAF3IP2O43734 574 aaPredicted RBP24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 WNT11O96014 354 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 HPRP00739 348 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 CD40P25942 277 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 PUDPQ08623 228 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 GKAP1Q5VSY0 366 aaPredicted RBP24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 C8orf82Q6P1X6 216 aaPredicted RBP24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 TSPYL5Q86VY4 417 aaPredicted RBP24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 ANKK1Q8NFD2 765 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 OR5J2Q8NH18 312 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 PERPQ96FX8 193 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 GSX2Q9BZM3 304 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 OBP2BQ9NPH6 170 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 LAMP3Q9UQV4 416 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 NOX1Q9Y5S8 564 aa24.21■■□□□ 1.47
ATPAF1-201ENST00000329231 SHISA9B4DS77 424 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 LRRN3E7EW58 273 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 M0R1B8 84 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 PLPP3O14495 311 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 TNFRSF1BP20333 461 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 SH3BGRP55822 239 aaPredicted RBP24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 TAS2R41P59536 307 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 ROR2Q01974 943 aaKnown RBP24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 LIPEQ05469 1076 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 Q5PR19 223 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 DEF8Q6ZN54 512 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 LINGO2Q7L985 606 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 KRTAP1-3Q8IUG1 177 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 PIAS4Q8N2W9 510 aaPredicted RBP24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 GPR137CQ8N3F9 429 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 PIK3C3Q8NEB9 887 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 OR1K1Q8NGR3 316 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 SMAP2Q8WU79 429 aaPredicted RBP24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 OR2M2Q96R28 347 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 ZNF426Q9BUY5 554 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 C1QTNF6Q9BXI9 259 aa24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 CISD1Q9NZ45 108 aaKnown RBP24.2■■□□□ 1.46
ATPAF1-201ENST00000329231 CADP27708 2225 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 RPL36A-HNRNPH2H7BZ11 118 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 NDUFAB1O14561 156 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 CH25HO95992 272 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 PAX1P15863 534 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 AHCYP23526 432 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 SLC7A2P52569 658 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 CDH11P55287 796 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 RPS4XP62701 263 aaKnown RBP24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 POU3F1Q03052 451 aaPredicted RBP24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 ZNF74Q16587 644 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 HIKESHIQ53FT3 197 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 PRSS57Q6UWY2 283 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 PXKQ7Z7A4 578 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 DEPDC4Q8N2C3 294 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 LZICQ8WZA0 190 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 TPD52L3Q96J77 140 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 FKRPQ9H9S5 495 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 NANSQ9NR45 359 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 ARID1AO14497 2285 aa24.19■■□□□ 1.46
ATPAF1-201ENST00000329231 OR5F1O95221 314 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 OR6A2O95222 327 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 DANCRP0C864 163 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 HLA-DOBP13765 273 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 PAX7P23759 505 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 OR1E2P47887 323 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 PTH2RP49190 550 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 SELENOWP63302 87 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 SLC25A3Q00325 362 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 TBRG1Q3YBR2 411 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 ANKRD16Q6P6B7 361 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 SLC22A25Q6T423 547 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 TMEM123Q8N131 208 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 PRSS27Q9BQR3 290 aa24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 ZNF701Q9NV72 531 aaPredicted RBP24.18■■□□□ 1.46
ATPAF1-201ENST00000329231 FAIMQ9NVQ4 179 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms