RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 VRK3Q8IV63 474 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ACVR1CQ8NER5 493 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OR51T1Q8NGJ9 327 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM18Q96B42 140 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 CMTM3Q96MX0 182 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FBXO7Q9Y3I1 522 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 RNF212BA8MTL3 300 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 H3BQ06 376 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 M0QZK8 103 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 AP4M1O00189 453 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GGCTO75223 188 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GPR32O75388 356 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SCAF4O95104 1147 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 THBS1P07996 1170 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FOLR1P15328 257 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF41P51814 821 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GLDNQ6ZMI3 551 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 MBOAT2Q6ZWT7 520 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 KDF1Q8NAX2 398 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OR14A16Q8NHC5 309 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SLC2A12Q8TD20 617 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SMIM19Q96E16 107 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SLC7A11Q9UPY5 501 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FOXE1O00358 373 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 C8orf89P0DMQ9 161 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 CALCBP10092 127 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ARAFP10398 606 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 CRYBB2P43320 205 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 XCR1P46094 333 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 WNT7BP56706 349 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 C9orf152Q5JTZ5 239 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF620Q6ZNG0 422 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 HSD17B13Q7Z5P4 300 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 NPAS4Q8IUM7 802 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF695Q8IW36 515 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF485Q8NCK3 441 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 LINC00052Q96N35 136 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 EVA1BQ9NVM1 165 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ANKUB1A6NFN9 424 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 MEIS3P2A8K0S8 358 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SPOCK1Q08629 439 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 P2RY14Q15391 338 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ENTPD8Q5MY95 495 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ELFN2Q5R3F8 820 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ADAM5Q6NVV9 412 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 DPY19L4Q7Z388 723 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 MDGA2Q7Z553 956 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OR5M8Q8NGP6 311 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OVCA2Q8WZ82 227 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 EDAQ92838 391 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 BORCS8Q96FH0 119 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GHRLQ9UBU3 117 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 KCNS2Q9ULS6 477 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TERTO14746 1132 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 CBX7O95931 251 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ASGR2P07307 311 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF250P15622 560 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 PDX1P52945 283 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 RPS15AP62244 130 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 RPP30P78346 268 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FOXO1Q12778 655 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FUT10Q6P4F1 479 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 NRSN1Q8IZ57 195 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ATOH1Q92858 354 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 BPIFA2Q96DR5 249 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 PCYT2Q99447 389 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 METTL9Q9H1A3 318 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SEC61A2Q9H9S3 476 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TSPAN6O43657 245 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 MTX2O75431 263 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FGF18O76093 207 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF16P17020 682 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TBPP20226 339 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GABRA3P34903 492 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FABP5Q01469 135 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM183BQ1AE95 376 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ETFRF1Q6IPR1 90 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OVCH1Q7RTY7 1134 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TECPR1Q7Z6L1 1165 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OR51S1Q8NGJ8 323 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 NINJ1Q92982 152 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SPACA7Q96KW9 195 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SEC11CQ9BY50 192 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 PDLIM7Q9NR12 457 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 RYDENQ9NUL5 291 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 FAM96BQ9Y3D0 163 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 A0A0G2JN53 185 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 PPP6CO00743 305 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 CSTAP01040 98 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SPP1P10451 314 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 HAPLN1P10915 354 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ACP5P13686 325 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ARSAP15289 507 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 GSG1Q2KHT4 349 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 HEPHL1Q6MZM0 1159 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TMEM179BQ7Z7N9 219 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 STT3BQ8TCJ2 826 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ARHGAP9Q9BRR9 750 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms