RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 MMACHCQ9Y4U1 282 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TRAV12-3A0A0B4J271 114 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 CYB561D2O14569 222 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TGFB1I1O43294 461 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 B3GALT4O96024 378 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 DAOP14920 347 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 BTF3P20290 206 aaKnown RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 C19orf54Q5BKX5 351 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 NIT1Q86X76 327 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 OR4M1Q8NGD0 313 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 SYNPRQ8TBG9 265 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 AAASQ9NRG9 546 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 CUTCQ9NTM9 273 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 BARHL2Q9NY43 387 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 FAM205AQ6ZU69 1335 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 PRAMEF22A3QJZ6 481 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 CRYAAP02489 173 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 MELTFP08582 738 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 SPATA31D3P0C874 917 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 PRSS3P35030 304 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 FOXO4P98177 505 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 SYPL2Q5VXT5 272 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 OR2A2Q6IF42 318 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 LDB1Q86U70 411 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 AMIGO3Q86WK7 504 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 RLN3Q8WXF3 142 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 FAM71F1Q96KD3 344 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 RBKSQ9H477 322 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 FBXO5Q9UKT4 447 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 HHLA2Q9UM44 414 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TRPM2O94759 1503 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3DA0A087WVF3 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3IA0A087WXS9 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3EA0A087X179 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3KA0A087X1G2 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 KRBA1A5PL33 1030 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3FA6NER0 549 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3LB9A6J9 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 RRP8O43159 456 aaKnown RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 DPM1O60762 260 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 CDK2AP2O75956 126 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3HP0C7X1 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 CTBSQ01459 385 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 DSC1Q08554 894 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 OTUD1Q5VV17 481 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3GQ6DHY5 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 PM20D1Q6GTS8 502 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3CQ6IPX1 549 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 ACSM6Q6P461 480 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 NPNTQ6UXI9 565 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TBC1D3Q8IZP1 549 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 OR10AD1Q8NGE0 317 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 HMGCLL1Q8TB92 370 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 GPR22Q99680 433 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 PRSS50Q9UI38 385 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 MOB4Q9Y3A3 225 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 SERPINE3A8MV23 424 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 I6L893 689 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 J3KRW8 73 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 J3QR06 171 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 EIF1BO60739 113 aaKnown RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 CKMT2P17540 419 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 RABGGTBP53611 331 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 MLLT11Q13015 90 aaPredicted RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 NKAIN1Q4KMZ8 207 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 NCR3LG1Q68D85 454 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 OR8J3Q8NGG0 315 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 TAF9BQ9HBM6 251 aa7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 F11RQ9Y624 299 aaKnown RBP7.13□□□□□ -1.27
LIMCH1-201ENST00000313860 SYCP2Q9BX26 1530 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 IL5P05113 134 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 RHOQP17081 205 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 ST3GAL1Q11201 340 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 SLBPQ14493 270 aaKnown RBP eCLIP7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 SIRT6Q8N6T7 355 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 OR4K14Q8NGD5 310 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 RXFP4Q8TDU9 374 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 ASB10Q8WXI3 467 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 ATP5SQ99766 215 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 NAA60Q9H7X0 242 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 PLAGL2Q9UPG8 496 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 ETV7Q9Y603 341 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 PRAMEF27A3QJZ7 478 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 C4BPAP04003 597 aaKnown RBP7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 SRGNP10124 158 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 PRF1P14222 555 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 IL2RBP14784 551 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 IGFBP4P22692 258 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 CDX1P47902 265 aaPredicted RBP7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 DGAT2L6Q6ZPD8 337 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 SCCPDHQ8NBX0 429 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 ZFAND1Q8TCF1 268 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 DUSP19Q8WTR2 217 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 ALG3Q92685 438 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 SGPP1Q9BX95 441 aa7.12□□□□□ -1.27
LIMCH1-201ENST00000313860 SLC25A18Q9H1K4 315 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms