RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RAB11AP62491 216 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 METRNLQ641Q3 311 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 FAM71E1Q6IPT2 247 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZGRF1Q86YA3 2104 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 RPL10LQ96L21 214 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 EDEM2Q9BV94 578 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PDFQ9HBH1 243 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 FOXJ3Q9UPW0 622 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TRAV36DV7A0A075B6V5 113 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 IQCF5A8MTL0 148 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 DVL1O14640 695 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 GOSR2O14653 212 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TCEA1P23193 301 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TRHRP34981 398 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 APOBEC1P41238 236 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 DVL1P1P54792 670 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZMAT1Q5H9K5 638 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SLC48A1Q6P1K1 146 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 APOOLQ6UXV4 268 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TMPPEQ6ZT21 453 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 LMNTD1Q8N9Z9 388 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM59Q9BXS4 323 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PRMT8Q9NR22 394 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 YLPM1P49750 1951 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF106Q9H2Y7 1883 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 F3P13726 295 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 RAB4AP20338 218 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 CTXN1P60606 82 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 FAM189BP81408 668 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 UGT8Q16880 541 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM52BQ4KMG9 183 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 DUSP18Q8NEJ0 188 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 OR52I1Q8NGK6 324 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 EGLN2Q96KS0 407 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SEMA6CQ9H3T2 930 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 CYP8B1Q9UNU6 501 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 RAB5AP20339 215 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 OR1Q1Q15612 314 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 THEM4Q5T1C6 240 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 RNF39Q9H2S5 420 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PNO1Q9NRX1 252 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF850A8MQ14 1090 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ABLIM3O94929 683 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SLC34A2O95436 690 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 AKR1C4P17516 323 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF74Q16587 644 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 GPR157Q5UAW9 335 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TXNDC8Q6A555 127 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF778Q96MU6 729 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZDHHC11BP0C7U3 371 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 BMPR1AP36894 532 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SNTB1Q13884 538 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF345Q14585 488 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 LEG1Q6P5S2 330 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 Q6ZSR9 355 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ABHD4Q8TB40 342 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PP6455Q8WZ26 134 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SAMD8Q96LT4 415 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PTCHD1Q96NR3 888 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 NKX3-1Q99801 234 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 CENPMQ9NSP4 180 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ARFGEF3Q5TH69 2177 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 HMX2A2RU54 273 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 B4DEV8 164 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SAP18O00422 153 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PPP1R2P9O14990 202 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SURF4O15260 269 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PAPLNO95428 1278 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 HMGN2P05204 90 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 C21orf33P30042 268 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 GPM6BQ13491 265 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SDK2Q58EX2 2172 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 KCTD9Q7L273 389 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 C1orf174Q8IYL3 243 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SPNS1Q9H2V7 528 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 LYRM2Q9NU23 88 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 DNAJB11Q9UBS4 358 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 MTX2O75431 263 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SFTPBP07988 381 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PAX6P26367 422 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 KCNJ10P78508 379 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 GTDC1Q4AE62 458 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 DPPA3Q6W0C5 159 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 OR2W3Q7Z3T1 314 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 OR5H6Q8NGV6 325 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 FGF14Q92915 247 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 NTNG2Q96CW9 530 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 ABCG8Q9H221 673 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 A8MVM7 634 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 PRKACAP17612 351 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 GPR4P46093 362 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 SGSHP51688 502 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 PNRC1Q12796 327 aaPredicted RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 TNK1Q13470 666 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF695Q8IW36 515 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 NUDT16L1Q9BRJ7 211 aaKnown RBP8.17□□□□□ -1.1
COL6A5-202ENST00000312481 MCCC2Q9HCC0 563 aa8.17□□□□□ -1.1
COL6A5-202ENST00000312481 IL23AQ9NPF7 189 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms