RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 MIB2Q96AX9 1013 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 NMNAT3Q96T66 252 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 MRPS18AQ9NVS2 196 aaKnown RBP20.25■□□□□ 0.83
IRF3-201ENST00000309877 FAM166BA8MTA8 275 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 MS4A18H0YCH9 400 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 PMS2P2O95744 297 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 DIO1P49895 249 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 SLC16A1P53985 500 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 KRR1Q13601 381 aaKnown RBP20.24■□□□□ 0.83
IRF3-201ENST00000309877 MS4A18Q3C1V0 323 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 LEG1Q6P5S2 330 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 GPR141Q7Z602 305 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 NPEPL1Q8NDH3 523 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 TMIGD2Q96BF3 282 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 LGALS12Q96DT0 336 aa20.24■□□□□ 0.83
IRF3-201ENST00000309877 WARS2Q9UGM6 360 aaKnown RBP20.24■□□□□ 0.83
IRF3-201ENST00000309877 SLC22A31A6NKX4 558 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 XKRYO14609 159 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 FZD7O75084 574 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 HPNP05981 417 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 ATP6V1E1P36543 226 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 RPL27P61353 136 aaKnown RBP20.23■□□□□ 0.83
IRF3-201ENST00000309877 ACKR1Q16570 336 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 GTF2IRD2BQ6EKJ0 949 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.23■□□□□ 0.83
IRF3-201ENST00000309877 GTF2IRD2Q86UP8 949 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 GHDCQ8N2G8 530 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 KDM8Q8N371 416 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 TMEM99Q8N816 258 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 ADPRHL1Q8NDY3 354 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 OR52I1Q8NGK6 324 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 OR9Q1Q8NGQ5 310 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 RORBQ92753 470 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 KLHL15Q96M94 604 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 TXNIPQ9H3M7 391 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 CCDC86Q9H6F5 360 aaKnown RBP20.23■□□□□ 0.83
IRF3-201ENST00000309877 ACOT13Q9NPJ3 140 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 NDUFA13Q9P0J0 144 aa20.23■□□□□ 0.83
IRF3-201ENST00000309877 RAB36O95755 333 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 CDKN2AP42771 156 aaKnown RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 LGALS3BPQ08380 585 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 TMED1Q13445 227 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 SPACA3Q8IXA5 215 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 TMEM251Q8N6I4 163 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 ARIH2OSQ8N7S6 290 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 C9orf43Q8TAL5 461 aaPredicted RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 FAR1Q8WVX9 515 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 TUBA1CQ9BQE3 449 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 CDCA4Q9BXL8 241 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 SMIM31A0A1B0GVY4 71 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 OR6C68A6NDL8 312 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 LINC01387J3KSC0 135 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 GLSO94925 669 aaPredicted RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 APOL3O95236 402 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 ACVR1BP36896 505 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 MAGEA5P43359 124 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 PPIAP62937 165 aaKnown RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 CSNK2A1P68400 391 aaPredicted RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 RAB39AQ14964 217 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 MESTQ5EB52 335 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 ARMC4Q5T2S8 1044 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 SLC22A16Q86VW1 577 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 ZFP62Q8NB50 900 aaPredicted RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 MUL1Q969V5 352 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 TEAD3Q99594 435 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 SMAD5Q99717 465 aaKnown RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 FAM192AQ9GZU8 254 aa20.22■□□□□ 0.83
IRF3-201ENST00000309877 DIMT1Q9UNQ2 313 aaKnown RBP20.22■□□□□ 0.83
IRF3-201ENST00000309877 ZNF99A8MXY4 864 aaPredicted RBP20.21■□□□□ 0.83
IRF3-201ENST00000309877 NPIPA5E9PKD4 350 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 ARHGEF9O43307 516 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 RENP00797 406 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 IGHMP01871 453 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 GYPBP06028 91 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 CLUP10909 449 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 POU3F2P20265 443 aaPredicted RBP20.21■□□□□ 0.83
IRF3-201ENST00000309877 DCKP27707 260 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 GTF2A1P52655 376 aaPredicted RBP20.21■□□□□ 0.83
IRF3-201ENST00000309877 TBCEQ15813 527 aaPredicted RBP20.21■□□□□ 0.83
IRF3-201ENST00000309877 HYAL4Q2M3T9 481 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 TMEM225Q6GV28 225 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 PXKQ7Z7A4 578 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 DDOQ99489 341 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 FGF20Q9NP95 211 aaPredicted RBP20.21■□□□□ 0.83
IRF3-201ENST00000309877 NPIPA1Q9UND3 350 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 SSUH2Q9Y2M2 353 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 CSAG2Q9Y5P2 127 aa20.21■□□□□ 0.83
IRF3-201ENST00000309877 A0A0J9YW62 118 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 A0A1W2PNV4 684 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 TNFSF11O14788 317 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 RRP8O43159 456 aaKnown RBP20.2■□□□□ 0.82
IRF3-201ENST00000309877 EIF1BO60739 113 aaKnown RBP20.2■□□□□ 0.82
IRF3-201ENST00000309877 INMTO95050 263 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 HLA-DOBP13765 273 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 SLC2A5P22732 501 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 TTKP33981 857 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 EIF2S3P41091 472 aaKnown RBP20.2■□□□□ 0.82
IRF3-201ENST00000309877 DAP3P51398 398 aaKnown RBP20.2■□□□□ 0.82
IRF3-201ENST00000309877 GFRA1P56159 465 aa20.2■□□□□ 0.82
IRF3-201ENST00000309877 HSF1Q00613 529 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms