RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CAMK2DQ13557 499 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 GALEQ14376 348 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 AGERQ15109 404 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 LRRC37A5PQ49AS3 106 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZMAT1Q5H9K5 638 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 KMT5CQ86Y97 462 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 C10orf111Q8N326 155 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 RAB40AQ8WXH6 277 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZG16BQ96DA0 208 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ARHGDIGQ99819 225 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 ULBP2Q9BZM5 246 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 NUBP2Q9Y5Y2 271 aa10.49□□□□□ -0.73
PCDHGC3-201ENST00000308177 PIAS2O75928 621 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 MEP1BQ16820 701 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 Q6ZNX1 250 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 NDUFAF7Q7L592 441 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 PM20D2Q8IYS1 436 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 YIPF6Q96EC8 236 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 NDUFB11Q9NX14 153 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 A6NL46 340 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 SNAPC5O75971 98 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 TGFBR1P36897 503 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 BIDP55957 195 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 CLDN12P56749 244 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 AQP6Q13520 282 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 FAM205BPQ63HN1 556 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 FIP1L1Q6UN15 594 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 C1orf198Q9H425 327 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 NOX4Q9NPH5 578 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 OTOFQ9HC10 1997 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 SURF4O15260 269 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 TPD52L2O43399 206 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 WDPCPO95876 746 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 MSX1P28360 303 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 EIF1P41567 113 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 EMDP50402 254 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 EPHA4P54764 986 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 LTBQ06643 244 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 PUDPQ08623 228 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 ARL6IP1Q15041 203 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 RSU1Q15404 277 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 COL28A1Q2UY09 1125 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 TSSK4Q6SA08 328 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 KDM8Q8N371 416 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 SPERTQ8NA61 448 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 BBS1Q8NFJ9 593 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 OR4N2Q8NGD1 307 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 OPALINQ96PE5 141 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 C7orf50Q9BRJ6 194 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC6A14Q9UN76 642 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 MRPS2Q9Y399 296 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 LILRB5O75023 590 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 RAB3DO95716 219 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 CELA2BP08218 269 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 MYF5P13349 255 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 GIFP27352 417 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 NCCRP1Q6ZVX7 275 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 MORN4Q8NDC4 146 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 ZNF764Q96H86 408 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 PLA2G12AQ9BZM1 189 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 LAT2Q9GZY6 243 aa10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 MCTS1Q9ULC4 181 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 YARS2Q9Y2Z4 477 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-201ENST00000308177 DICER1Q9UPY3 1922 aaKnown RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 SPAG17Q6Q759 2223 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 IGHV1OR15-9A0A0B4J2B8 117 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 A0A1W2PPV9 198 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CRTAPO75718 401 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 SCGB1D2O95969 90 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 IGHA2P01877 340 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CPEP16870 476 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 GPR3P46089 330 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 RAB2AP61019 212 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC35A1P78382 337 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ALKBH1Q13686 389 aaKnown RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 HACD4Q5VWC8 232 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 FCRL6Q6DN72 434 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 KIRREL2Q6UWL6 708 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC16A9Q7RTY1 509 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 PHYHIPQ92561 330 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC25A46Q96AG3 418 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 FOXRED1Q96CU9 486 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 FCRL1Q96LA6 429 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 PDCD1LG2Q9BQ51 273 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 SLC19A3Q9BZV2 496 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 WNT16Q9UBV4 365 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 BOKQ9UMX3 212 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 GGT3PA6NGU5 568 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ICOSLGO75144 302 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 NKX2-2O95096 273 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 PRH1P02810 166 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CSF1P09603 554 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 CHRNB1P11230 501 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 ATAD3CQ5T2N8 411 aa10.47□□□□□ -0.73
PCDHGC3-201ENST00000308177 EIF5AL1Q6IS14 154 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms