RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GYPBP06028 91 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 PSMA1P25786 263 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SERPINB10P48595 397 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 MAP2K6P52564 334 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SLC16A1P53985 500 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 MLF1P58340 268 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 RPS3AP61247 264 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ACTC1P68032 377 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ACTA1P68133 377 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 BDH1Q02338 343 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 LGALS3BPQ08380 585 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 DBPQ10586 325 aaPredicted RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 FOXF1Q12946 379 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 CHAF1BQ13112 559 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 GALEQ14376 348 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 MOGQ16653 247 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 PLPPR5Q32ZL2 321 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TMEM164Q5U3C3 297 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 GPR139Q6DWJ6 353 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ARSKQ6UWY0 536 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 EXD3Q8N9H8 876 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 POMGNT2Q8NAT1 580 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 OR5J2Q8NH18 312 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ZPLD1Q8TCW7 415 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SPRYD4Q8WW59 207 aaPredicted RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 UFD1Q92890 307 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 MRGPRX4Q96LA9 322 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TSPAN32Q96QS1 320 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 NPAS1Q99742 590 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ALG8Q9BVK2 526 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ASPNQ9BXN1 380 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 OR11A1Q9GZK7 315 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 RNF167Q9H6Y7 350 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SH2D2AQ9NP31 389 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TAS2R5Q9NYW4 299 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 CCDC59Q9P031 241 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 NCKAP5O14513 1909 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 LOC400499M0QZD8 3231 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 AKAP8O43823 692 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 F13BP05160 661 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ICAM2P13598 275 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SPI1P17947 270 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 OTX2P32243 289 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 CDKN2AP42771 156 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 DIO1P49895 249 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ENTPD1P49961 510 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SSR4P51571 173 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF41P51814 821 aaPredicted RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 RPS15P62841 145 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF85Q03923 595 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 KRR1Q13601 381 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TRIP6Q15654 476 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 LEG1Q6P5S2 330 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TMPRSS11AQ6ZMR5 421 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ADCK1Q86TW2 530 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 JAZF1Q86VZ6 243 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 RPS19BP1Q86WX3 136 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 OR10H4Q8NGA5 316 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ASB15Q8WXK1 588 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 SMPDL3BQ92485 455 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 TRMT61AQ96FX7 289 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 FAM117AQ9C073 453 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 B3GNT4Q9C0J1 378 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 CDCP1Q9H5V8 836 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ASB6Q9NWX5 421 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 MRPL39Q9NYK5 338 aaKnown RBP10.73□□□□□ -0.69
TRIM40-205ENST00000307859 GRHPRQ9UBQ7 328 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 VDAC3Q9Y277 283 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 A3GALT2U3KPV4 340 aa10.73□□□□□ -0.69
TRIM40-205ENST00000307859 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 DAPL1A0PJW8 107 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 METTL15A6NJ78 407 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 C21orf140B9A014 251 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 IGHMP01871 453 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 TFP02787 698 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 MRPL3P09001 348 aaKnown RBP10.72□□□□□ -0.69
TRIM40-205ENST00000307859 FTH1P19P0C7X4 201 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 GRPRP30550 384 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 GABRA5P31644 462 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 Q0VFX4 171 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 DCTN2Q13561 401 aaKnown RBP10.72□□□□□ -0.69
TRIM40-205ENST00000307859 DNASE1L3Q13609 305 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 MFSD13AQ14CX5 517 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 PON3Q15166 354 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.72□□□□□ -0.69
TRIM40-205ENST00000307859 MESTQ5EB52 335 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 LINC01590Q5TEZ4 76 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 H3F3CQ6NXT2 135 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 CD200R1LQ6Q8B3 271 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 IL20RBQ6UXL0 311 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 ZBTB46Q86UZ6 589 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 WDSUB1Q8N9V3 476 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 MFSD8Q8NHS3 518 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 POC1BQ8TC44 478 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 PAQR8Q8TEZ7 354 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 ZNRF4Q8WWF5 429 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 SLC25A36Q96CQ1 311 aa10.72□□□□□ -0.69
TRIM40-205ENST00000307859 ZMYND19Q96E35 227 aaPredicted RBP10.72□□□□□ -0.69
TRIM40-205ENST00000307859 SNX18Q96RF0 628 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms