RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 POU3F1Q03052 451 aaPredicted RBP19.82■□□□□ 0.76
HOXD4-201ENST00000306324 CASP12Q6UXS9 341 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 STK32CQ86UX6 486 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 EPHX4Q8IUS5 362 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 ZNF100Q8IYN0 542 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 TAS2R5Q9NYW4 299 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 JKAMPQ9P055 326 aa19.82■□□□□ 0.76
HOXD4-201ENST00000306324 A8MXE2 369 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 RNF13O43567 381 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 NTF4P34130 210 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 OMPP47874 163 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 LAPTM4AQ15012 233 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 TMPRSS11FQ6ZWK6 438 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 OAFQ86UD1 273 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 ZIC4Q8N9L1 334 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 OR4C15Q8NGM1 316 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 OR13C2Q8NGS9 318 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 OR51A7Q8NH64 312 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 AP4S1Q9Y587 144 aa19.81■□□□□ 0.76
HOXD4-201ENST00000306324 TRAV27A0A087WT01 109 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 LOC102725191A0A1B0GVB3 256 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 CDC42EP2O14613 210 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 CLDN1O95832 211 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 EDNRAP25101 427 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 IFNGR2P38484 337 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 AQP2P41181 271 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 CLDN17P56750 224 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 RPL18Q07020 188 aaKnown RBP19.8■□□□□ 0.76
HOXD4-201ENST00000306324 TFAP2EQ6VUC0 442 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 AAED1Q7RTV5 226 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 PXKQ7Z7A4 578 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 APH1AQ96BI3 265 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 LRRC46Q96FV0 321 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 RBM24Q9BX46 236 aaKnown RBP19.8■□□□□ 0.76
HOXD4-201ENST00000306324 DENND2DQ9H6A0 471 aaPredicted RBP19.8■□□□□ 0.76
HOXD4-201ENST00000306324 PARPBPQ9NWS1 579 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 DNAJB9Q9UBS3 223 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 NOX1Q9Y5S8 564 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 BAHCC1Q9P281 2608 aa19.8■□□□□ 0.76
HOXD4-201ENST00000306324 PRSS44E7EML9 344 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 TRAF3IP2O43734 574 aaPredicted RBP19.79■□□□□ 0.76
HOXD4-201ENST00000306324 E2F6O75461 281 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 CCNB2O95067 398 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 IGHV3-9P01782 118 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 UQCRC1P31930 480 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 OR3A2P47893 321 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 SLC9A3P48764 834 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 IST1P53990 364 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 TFF3Q07654 80 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 ZP4Q12836 540 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 ZNF474Q6S9Z5 364 aaPredicted RBP19.79■□□□□ 0.76
HOXD4-201ENST00000306324 ZER1Q7Z7L7 766 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 ANKK1Q8NFD2 765 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 OR9Q2Q8NGE9 314 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 MOSPD2Q8NHP6 518 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 PYDC1Q8WXC3 89 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 TMEM45BQ96B21 275 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 DUS3LQ96G46 650 aaKnown RBP19.79■□□□□ 0.76
HOXD4-201ENST00000306324 ARMC1Q9NVT9 282 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 PRSS50Q9UI38 385 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 KLF2Q9Y5W3 355 aaPredicted RBP19.79■□□□□ 0.76
HOXD4-201ENST00000306324 PTPN13Q12923 2485 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 ANKRD65E5RJM6 399 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 CLOCKO15516 846 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 F13BP05160 661 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 GRNP28799 593 aaKnown RBP19.79■□□□□ 0.76
HOXD4-201ENST00000306324 NIPAL3Q6P499 406 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 UBE2J2Q8N2K1 259 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 LINC00471Q8N535 108 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 TNFRSF13CQ96RJ3 184 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 FANCFQ9NPI8 374 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 MED29Q9NX70 200 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 GALNT8Q9NY28 637 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 HIF3AQ9Y2N7 669 aa19.79■□□□□ 0.76
HOXD4-201ENST00000306324 HNRNPRO43390 633 aaKnown RBP19.78■□□□□ 0.76
HOXD4-201ENST00000306324 DEAF1O75398 565 aaPredicted RBP19.78■□□□□ 0.76
HOXD4-201ENST00000306324 SELENOPP49908 381 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 RPS4XP62701 263 aaKnown RBP19.78■□□□□ 0.76
HOXD4-201ENST00000306324 MICAQ29983 383 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 FBXL19-AS1Q494R0 122 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 ALG10Q5BKT4 473 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 PGBD2Q6P3X8 592 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 BEND4Q6ZU67 534 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 RNASE6Q93091 150 aaKnown RBP19.78■□□□□ 0.76
HOXD4-201ENST00000306324 TXNDC15Q96J42 360 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 GPA33Q99795 319 aa19.78■□□□□ 0.76
HOXD4-201ENST00000306324 UNC119BA6NIH7 251 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 C19orf84I3L1E1 186 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 AKAP8O43823 692 aaKnown RBP19.77■□□□□ 0.76
HOXD4-201ENST00000306324 TSPAN19P0C672 248 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 IFNGR1P15260 489 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 DNAJA1P31689 397 aaKnown RBP19.77■□□□□ 0.76
HOXD4-201ENST00000306324 ANKDD1AQ495B1 522 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 ZBED5Q49AG3 693 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 C1orf94Q6P1W5 598 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 SLC35D2Q76EJ3 337 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 GNPDA2Q8TDQ7 276 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 PSMG3-AS1Q96PY0 264 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 EMC6Q9BV81 110 aa19.77■□□□□ 0.76
HOXD4-201ENST00000306324 INIPQ9NRY2 104 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms