RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ADPRMQ3LIE5 342 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 C6orf132Q5T0Z8 1188 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 BBS1Q8NFJ9 593 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SLC7A6Q92536 515 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CPNE4Q96A23 557 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 DUSP23Q9BVJ7 150 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 PRDM9Q9NQV7 894 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 JTBO76095 146 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 PAPLNO95428 1278 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 GPR75O95800 540 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RAF1P04049 648 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF728P0DKX0 622 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 GAB1Q13480 694 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SNTB1Q13884 538 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ABHD17BQ5VST6 288 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 YIPF5Q969M3 257 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 TCTN2Q96GX1 697 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 STACQ99469 402 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 MOB1AQ9H8S9 216 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 C12orf10Q9HB07 376 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 COQ3Q9NZJ6 369 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 C5AR2Q9P296 337 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 FURINP09958 794 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ACRP10323 421 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 DRD1P21728 446 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 HNRNPA1L2Q32P51 320 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 FBXW12Q6X9E4 464 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 EXO1Q9UQ84 846 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 MBLAC1A4D2B0 266 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR5K3A6NET4 321 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 PRSS44E7EML9 344 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 K7EQM0 130 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 PTGESO14684 152 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 AIFM1O95831 613 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 STEAP1BQ6NZ63 245 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CTU1Q7Z7A3 348 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR52R1Q8NGF1 315 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 VN1R3Q9BXE9 311 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 QRSL1Q9H0R6 528 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 C1orf198Q9H425 327 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 DNAJB11Q9UBS4 358 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 I6L893 689 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 TO15178 435 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 NCR1O76036 304 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 FABP1P07148 127 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 POU3F2P20265 443 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CALCRP30988 508 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 EIF1P41567 113 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 XCR1P46094 333 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RPS18P62269 152 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SLC7A9P82251 487 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 EMC4Q5J8M3 183 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM31Q5JXX7 168 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 MANEAQ5SRI9 462 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SSX9Q7RTT3 188 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR51A2Q8NGJ7 313 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR13C2Q8NGS9 318 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CLSTN3Q9BQT9 956 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 GJD2Q9UKL4 321 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 HEPACAM2A8MVW5 462 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 SBK2P0C263 348 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 LCN6P62502 163 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 HNF4GQ14541 408 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 TAF9Q16594 264 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF789Q5FWF6 425 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 AADACL3Q5VUY0 350 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 GHSRQ92847 366 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM43Q9BTV4 400 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 GAREM1Q9H706 876 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 PATZ1Q9HBE1 687 aaKnown RBP7.09□□□□□ -1.27
SF3B3-201ENST00000302516 PLEK2Q9NYT0 353 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 PLSCR5A0PG75 271 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 POM121CA8CG34 1229 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 IQCF3P0C7M6 154 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 ICAM2P13598 275 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 H3F3AP84243 136 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 ST7LQ8TDW4 575 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 THAP3Q8WTV1 239 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-201ENST00000302516 SDSLQ96GA7 329 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 MED18Q9BUE0 208 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 GPR174Q9BXC1 333 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 SMIM3Q9BZL3 60 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 PPP1R14DQ9NXH3 145 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 PUS1Q9Y606 427 aaKnown RBP eCLIP7.09□□□□□ -1.27
SF3B3-201ENST00000302516 K7ERQ8 282 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 SEC61A1P61619 476 aaKnown RBP7.09□□□□□ -1.27
SF3B3-201ENST00000302516 ALKBH1Q13686 389 aaKnown RBP7.09□□□□□ -1.27
SF3B3-201ENST00000302516 OPN5Q6U736 354 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 ADAMTSL4Q6UY14 1074 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 TSACCQ96A04 125 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-201ENST00000302516 UFSP2Q9NUQ7 469 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 TRAV36DV7A0A075B6V5 113 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 SMIM18P0DKX4 95 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 PCK2Q16822 640 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 NPSR1Q6W5P4 371 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF852Q6ZMS4 543 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 OR6K3Q8NGY3 331 aa7.09□□□□□ -1.27
SF3B3-201ENST00000302516 LINC01599Q8WXQ3 324 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms