RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 HOXA1P49639 335 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-201ENST00000297423 TAS2R20P59543 309 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 LTBQ06643 244 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 EIF2B1Q14232 305 aaKnown RBP13.66□□□□□ -0.22
SPIDR-201ENST00000297423 PEA15Q15121 130 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 CDKN3Q16667 212 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 FAM76BQ5HYJ3 339 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 OR2W3Q7Z3T1 314 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 TMEFF1Q8IYR6 380 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 OR1M1Q8NGA1 313 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 WDR77Q9BQA1 342 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-201ENST00000297423 KXD1Q9BQD3 176 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 POFUT1Q9H488 388 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 CTSFQ9UBX1 484 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 ADAM18Q9Y3Q7 739 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 NAP1L6A6NFF2 107 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 SLC25A12O75746 678 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 UBBP0CG47 229 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 UBCP0CG48 685 aaKnown RBP13.66□□□□□ -0.22
SPIDR-201ENST00000297423 OR2B8PP59922 312 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 MBOAT2Q6ZWT7 520 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 RAB42Q8N4Z0 105 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 OR14A16Q8NHC5 309 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 GIMAP5Q96F15 307 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 LGR4Q9BXB1 951 aa13.66□□□□□ -0.22
SPIDR-201ENST00000297423 ZNF28P17035 718 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 CAPZA1P52907 286 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 RPS15P62841 145 aaKnown RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 TRAM1Q15629 374 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 AMZ1Q400G9 498 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 RNLSQ5VYX0 342 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 NAA40Q86UY6 237 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 AMZ2Q86W34 360 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 RASGRP3Q8IV61 690 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 SLC35F2Q8IXU6 374 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 UBL7Q96S82 380 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 SARGQ9BW04 601 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 ZCCHC4Q9H5U6 513 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 IL20Q9NYY1 176 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 NDRG3Q9UGV2 375 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 KCNK6Q9Y257 313 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 AUP1Q9Y679 476 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 AHCTF1Q8WYP5 2266 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 WDR87Q6ZQQ6 2873 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 RAB3DO95716 219 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 EXOSC6Q5RKV6 272 aaKnown RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 KLHDC8AQ8IYD2 350 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 TRAM1L1Q8N609 369 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 NMNAT3Q96T66 252 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 ANKRD19PQ9H560 264 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 ZNF629Q9UEG4 869 aaPredicted RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 NDOR1Q9UHB4 597 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 PLXNA4Q9HCM2 1894 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 NDUFS6O75380 124 aaKnown RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 RORAP35398 523 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 SNTB1Q13884 538 aaKnown RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 ARHGAP40Q5TG30 622 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 TSSK2Q96PF2 358 aa13.65□□□□□ -0.22
SPIDR-201ENST00000297423 CNN2Q99439 309 aaKnown RBP13.65□□□□□ -0.22
SPIDR-201ENST00000297423 OR5H14A6NHG9 310 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 IFITM5A6NNB3 132 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 POU2F2P09086 479 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 KLHL26Q53HC5 615 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF805Q5CZA5 627 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF626Q68DY1 528 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 ADAM5Q6NVV9 412 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 IL17RCQ8NAC3 791 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 OR56A1Q8NGH5 318 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 DCUN1D4Q92564 292 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 KLHL42Q9P2K6 505 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 MIOXQ9UGB7 285 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 ING1Q9UK53 422 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3DA0A087WVF3 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3IA0A087WXS9 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3EA0A087X179 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3KA0A087X1G2 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 CXorf51AA0A1B0GTR3 108 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 SLC5A10A0PJK1 596 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3FA6NER0 549 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3LB9A6J9 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 IMPA2O14732 288 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 FBXO24O75426 580 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 EIF3GO75821 320 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3HP0C7X1 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 GDI1P31150 447 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3GQ6DHY5 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3CQ6IPX1 549 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TBC1D3Q8IZP1 549 aaPredicted RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 JAGN1Q8N5M9 183 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 GATSQ8NAP1 163 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 CCDC107Q8WV48 283 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms