RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 OR4E2Q8NGC2 313 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 OR4K2Q8NGD2 314 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 OR2A12Q8NGT7 310 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 LGALS14Q8TCE9 139 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 C16orf78Q8WTQ4 265 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 COL26A1Q96A83 441 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 GALNT14Q96FL9 552 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PPP1R16AQ96I34 528 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SEC22AQ96IW7 307 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TIMP4Q99727 224 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 MICU1Q9BPX6 476 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SELENOIQ9C0D9 397 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 BHLHE41Q9C0J9 482 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 LMAN1LQ9HAT1 526 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CCDC88CQ9P219 2028 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 BRCA2P51587 3418 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TSC2P49815 1807 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ANTXRLA6NF34 631 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 CDRT15L2A8MXV6 281 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 F8VVB4 439 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 F8VWA3 439 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 MAN2B1O00754 1011 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 TCF21O43680 179 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 GPR32O75388 356 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 PPIBP23284 216 aaKnown RBP8.46□□□□□ -1.05
PDGFC-201ENST00000274071 PPP2R1BP30154 601 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ATP6V1E1P36543 226 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 NSG1P42857 185 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 PTH2RP49190 550 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 SKP1P63208 163 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 TSPAN31Q12999 210 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 CBFBQ13951 182 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF620Q6ZNG0 422 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 HIST2H3AQ71DI3 136 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 CAMKMTQ7Z624 323 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF321PQ8N8H1 164 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF610Q8N9Z0 462 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF671Q8TAW3 534 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 MR1Q95460 341 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 NTNG2Q96CW9 530 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 PTCHD1Q96NR3 888 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 KLHL5Q96PQ7 755 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 CXCL16Q9H2A7 254 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 OR51V1Q9H2C8 321 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 LANCL2Q9NS86 450 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 CALML5Q9NZT1 146 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 FLVCR1Q9Y5Y0 555 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ANKRD36A6QL64 1941 aa8.46□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF749O43361 778 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 GJB3O75712 270 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 AGR2O95994 175 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 GSTP1P09211 210 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 MMP11P24347 488 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 THBS4P35443 961 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 P2RX1P51575 399 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 ATP1B3P54709 279 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 BDH1Q02338 343 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SLC10A7Q0GE19 358 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CCL14Q16627 93 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 PNLIPRP3Q17RR3 467 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 VWA2Q5GFL6 755 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 UBE2NLQ5JXB2 153 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 PTRHD1Q6GMV3 140 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SLC25A24Q6NUK1 477 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SLC35F3Q8IY50 421 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 OR5W2Q8NH69 310 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 PPP1R1CQ8WVI7 109 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 WRAP53Q9BUR4 548 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 MRI1Q9BV20 369 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SCN1AP35498 2009 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CKAP5Q14008 2032 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 A0A1W2PPQ1 181 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SMCO3A2RU48 225 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 HSBP1L1C9JCN9 74 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CLDN5O00501 218 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 NME6O75414 186 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 FBXO24O75426 580 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CLDN9O95484 217 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 PPP1R3DO95685 299 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SERPINA5P05154 406 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 H1F0P07305 194 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CHRM4P08173 479 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 DVL1P1P54792 670 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 CDC42EP1Q00587 391 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 DCAF4L1Q3SXM0 396 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 XKR4Q5GH76 650 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 RIPPLY2Q5TAB7 128 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 TNFAIP8L2Q6P589 184 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 FAM199XQ6PEV8 388 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 RBM45Q8IUH3 476 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 PIANPQ8IYJ0 282 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 RNF175Q8N4F7 328 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 INO80EQ8NBZ0 244 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 APOBEC4Q8WW27 367 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 DTD2Q96FN9 168 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 SMIM8Q96KF7 97 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms