RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 CELP19835 753 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 CD79BP40259 229 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 NR4A2P43354 598 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 E2F1Q01094 437 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 SF3B4Q15427 424 aaKnown RBP eCLIP13.88□□□□□ -0.193e-6■■■■□ 21.6
SF3B4-201ENST00000271628 GXYLT1Q4G148 440 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
SF3B4-201ENST00000271628 FAM69AQ5T7M9 428 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 FAM122BQ7Z309 247 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 TMEM99Q8N816 258 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 CAPSLQ8WWF8 208 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 NEDD4LQ96PU5 975 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 SNX18Q96RF0 628 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 NMNAT3Q96T66 252 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 ZNF700Q9H0M5 742 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 TRIM36Q9NQ86 728 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 KLRF1Q9NZS2 232 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 GRHPRQ9UBQ7 328 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 A0A0C4DFX4 3053 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 TRDV1A0A1B0GX56 115 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 C17orf51A8MQB3 221 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TMCC2O75069 709 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 OR2J2O76002 312 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 LALBAP00709 142 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 IGHEP01854 428 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 BGLAPP02818 100 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 MT-ND5P03915 603 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 UMODP07911 640 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 OR2T7P0C7T2 308 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 GALP22466 123 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 DDOSTP39656 456 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 APOBEC1P41238 236 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TGM4P49221 684 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 MAP2K6P52564 334 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 NKX2-5P52952 324 aaPredicted RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 RPS25P62851 125 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 IFITM2Q01629 132 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 RPL18Q07020 188 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 GPR139Q6DWJ6 353 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 KLBQ86Z14 1044 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 ATP6V1C2Q8NEY4 427 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 OR2T27Q8NH04 317 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 M1APQ8TC57 530 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 CNN2Q99439 309 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TBX5Q99593 518 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 NMNAT2Q9BZQ4 307 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 ASB6Q9NWX5 421 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 N6AMT1Q9Y5N5 214 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TEX13CA0A0J9YWL9 993 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 MEIOCA2RUB1 952 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 MRPL3P09001 348 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 AZGP1P25311 298 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 DIO1P49895 249 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 SLC25A1P53007 311 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 DLX5P56178 289 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TAS2R43P59537 309 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 NTRK2Q16620 822 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 ATAD3CQ5T2N8 411 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 LEG1Q6P5S2 330 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 OR6S1Q8NH40 331 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 Q96M85 177 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 RASL10BQ96S79 203 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 ISG20L2Q9H9L3 353 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 RYDENQ9NUL5 291 aaKnown RBP13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TOR4AQ9NXH8 423 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 MOKQ9UQ07 419 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 LOXL2Q9Y4K0 774 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 B3GALT1Q9Y5Z6 326 aa13.87□□□□□ -0.19
SF3B4-201ENST00000271628 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 TMEM72A0PK05 275 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 FAM172BPA6NC97 362 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 OR6C68A6NDL8 312 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 HMX3A6NHT5 357 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 GLCEO94923 617 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 CSF3P09919 207 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 SPI1P17947 270 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 CD53P19397 219 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 FOLR3P41439 243 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 PPP3R1P63098 170 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 SGCBQ16585 318 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.86□□□□□ -0.19
SF3B4-201ENST00000271628 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 OR5M10Q6IEU7 315 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 METAP1DQ6UB28 335 aaPredicted RBP13.86□□□□□ -0.19
SF3B4-201ENST00000271628 LYPD8Q6UX82 237 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 RASD2Q96D21 266 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 MRPL48Q96GC5 212 aaKnown RBP13.86□□□□□ -0.19
SF3B4-201ENST00000271628 IMMP1LQ96LU5 166 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 TIMP4Q99727 224 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 TM9SF2Q99805 663 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 TP63Q9H3D4 680 aaPredicted RBP13.86□□□□□ -0.19
SF3B4-201ENST00000271628 METTL7AQ9H8H3 244 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 PPP4R1LQ9P1A2 415 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 PADI1Q9ULC6 663 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 CDX4O14627 284 aaPredicted RBP13.86□□□□□ -0.19
SF3B4-201ENST00000271628 F13BP05160 661 aa13.86□□□□□ -0.19
SF3B4-201ENST00000271628 CD59P13987 128 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms