RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ARL9Q6T311 187 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 RPTNQ6XPR3 784 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 OR6S1Q8NH40 331 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 NEIL3Q8TAT5 605 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 ASB15Q8WXK1 588 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 SPACA9Q96E40 222 aaPredicted RBP15.03■□□□□ -0
CCDC40-201ENST00000269318 PELI1Q96FA3 418 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 COX4I2Q96KJ9 171 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 TTTY10Q9BZA0 68 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 FAIMQ9NVQ4 179 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 NCOR1O75376 2440 aa15.03■□□□□ -0
CCDC40-201ENST00000269318 CFAP54Q96N23 3096 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 SLC35F4A4IF30 521 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 FAM171A2A8MVW0 826 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 MAGEB4O15481 346 aaPredicted RBP15.02■□□□□ -0
CCDC40-201ENST00000269318 AHSA1O95433 338 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 APOBEC1P41238 236 aaKnown RBP15.02■□□□□ -0
CCDC40-201ENST00000269318 EXT1Q16394 746 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 TP53I3Q53FA7 332 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 SPANXN2Q5MJ10 180 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 SLC30A2Q9BRI3 323 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 NCDNQ9UBB6 729 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 GRIP1Q9Y3R0 1128 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 WIF1Q9Y5W5 379 aa15.02■□□□□ -0
CCDC40-201ENST00000269318 H7C1C5 153 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 CASKO14936 926 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 OR2T1O43869 369 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 SC5DO75845 299 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 CD59P13987 128 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 MSX1P28360 303 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 LCN6P62502 163 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 HSF2Q03933 536 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 TRAM1Q15629 374 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 LAX1Q8IWV1 398 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 OR6V1Q8N148 313 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF511Q8NB15 262 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 KCNN2Q9H2S1 579 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 INIPQ9NRY2 104 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 MRPL39Q9NYK5 338 aaKnown RBP15.02□□□□□ -0.01
CCDC40-201ENST00000269318 PPP4R1LQ9P1A2 415 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 LOXL2Q9Y4K0 774 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 UGT2A1Q9Y4X1 527 aa15.02□□□□□ -0.01
CCDC40-201ENST00000269318 KIF26BQ2KJY2 2108 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 A0A1W2PQ72 361 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 SMIM30A4D0T7 59 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 C11orf98E9PRG8 122 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 PLPP3O14495 311 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CDX4O14627 284 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-201ENST00000269318 OGG1O15527 345 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 F8A1P23610 371 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CALRP27797 417 aaKnown RBP15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CASP3P42574 277 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CAV3P56539 151 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 FOXF1Q12946 379 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF181Q2M3W8 571 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 SLC25A53Q5H9E4 307 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 DCAF12Q5T6F0 453 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 EEF1A1P5Q5VTE0 462 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 SLC6A19Q695T7 634 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 LYSMD2Q8IV50 215 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 TIGD4Q8IY51 512 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 OR2T4Q8NH00 348 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF519Q8TB69 540 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 M1APQ8TC57 530 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CEP19Q96LK0 163 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 SDHCQ99643 169 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CCDC86Q9H6F5 360 aaKnown RBP15.01□□□□□ -0.01
CCDC40-201ENST00000269318 METTL7AQ9H8H3 244 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 SDHAF3Q9NRP4 125 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 AKAP7Q9P0M2 348 aaPredicted RBP15.01□□□□□ -0.01
CCDC40-201ENST00000269318 DAPK2Q9UIK4 370 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 VDAC3Q9Y277 283 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CMAHPQ9Y471 501 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 CPAMD8Q8IZJ3 1885 aa15.01□□□□□ -0.01
CCDC40-201ENST00000269318 RGS5O15539 181 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF208O43345 1280 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 TBX1O43435 398 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ITGA10O75578 1167 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 STK17BO94768 372 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 RENP00797 406 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 IGHMP01871 453 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 OCM2P0CE71 109 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 OCMP0CE72 109 aaPredicted RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 TGM1P22735 817 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 SLC3A1Q07837 685 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ACKR1Q16570 336 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 PLPPR5Q32ZL2 321 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF684Q5T5D7 378 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 SLC16A9Q7RTY1 509 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 NLGN4YQ8NFZ3 816 aaPredicted RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 OR11G2Q8NGC1 345 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF417Q8TAU3 575 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 SNX33Q8WV41 574 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 ZNF587Q96SQ5 575 aaPredicted RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 SYT4Q9H2B2 425 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 PPIL3Q9H2H8 161 aaKnown RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 MIXL1Q9H2W2 232 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 SRA1Q9HD15 236 aaKnown RBP15□□□□□ -0.01
CCDC40-201ENST00000269318 ABCB10Q9NRK6 738 aa15□□□□□ -0.01
CCDC40-201ENST00000269318 CHCHD2Q9Y6H1 151 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms