RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 SMIM4Q8WVI0 70 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 TNFAIP8L1Q8WVP5 186 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 TSEN15Q8WW01 171 aaKnown RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 SLC25A36Q96CQ1 311 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 SAV1Q9H4B6 383 aaPredicted RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 Q9N2J8 555 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 C2orf42Q9NWW7 574 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 AKAP7Q9P0M2 348 aaPredicted RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 ELF5Q9UKW6 265 aaPredicted RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 BRWD1Q9NSI6 2320 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 A0A1B0GVI7 797 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 PDCD5O14737 125 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 KHNYNO15037 678 aaKnown RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 PLGP00747 810 aaPredicted RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 IGKV1D-16P01601 117 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 CSN2P05814 226 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 TMIGD3P0DMS9 266 aaPredicted RBP11.58□□□□□ -0.56
LIG1-201ENST00000263274 CDK2P24941 298 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 MAOBP27338 520 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 KIAA1024LP59773 190 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 AP3S2P59780 193 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 OPCMLQ14982 345 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 CEBPEQ15744 281 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 LINC00303Q3SY05 128 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 UBE2NLQ5JXB2 153 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 PXKQ7Z7A4 578 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 PRR22Q8IZ63 422 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 GPR137Q96N19 417 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 SFXN2Q96NB2 322 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 ACTR6Q9GZN1 396 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 DCAF16Q9NXF7 216 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 BAIAP2Q9UQB8 552 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 MPDZO75970 2070 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 IFITM5A6NNB3 132 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 PSG6Q00889 435 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 LIPNQ5VXI9 398 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 OR5M10Q6IEU7 315 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 NHLRC1Q6VVB1 395 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 AVL9Q8NBF6 648 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 NSMAFQ92636 917 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 LMF1Q96S06 567 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 ZNF281Q9Y2X9 895 aa11.58□□□□□ -0.56
LIG1-201ENST00000263274 HEATR5AQ86XA9 2040 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 C2orf74A8MZ97 194 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 B4DGG1 531 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 PIN1P1O15428 100 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 CBX7O95931 251 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 COL9A1P20849 921 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 ART1P52961 327 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 SQSTM1Q13501 440 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 HTR4Q13639 388 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 PCGF3Q3KNV8 242 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 ZNF550Q7Z398 422 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 OR5AK2Q8NH90 309 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 DVL3Q92997 716 aaPredicted RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 TOE1Q96GM8 510 aaKnown RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 GAL3ST4Q96RP7 486 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 TTYH1Q9H313 450 aaPredicted RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 DNAJB12Q9NXW2 375 aaKnown RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 CPNE7Q9UBL6 633 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 LAMP5Q9UJQ1 280 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 LOC100509620A0A075B734 347 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 UBE2QL1A1L167 161 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 TOR1AO14656 332 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 CREBL2O60519 120 aaPredicted RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 MAOAP21397 527 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 RPS15P62841 145 aaKnown RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 PUDPQ08623 228 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 KLF9Q13886 244 aaPredicted RBP11.57□□□□□ -0.56
LIG1-201ENST00000263274 GRM7Q14831 915 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 MFSD13AQ14CX5 517 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 DPY19L4Q7Z388 723 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 PRSS42Q7Z5A4 293 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 RSC1A1Q92681 617 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 MARC2Q969Z3 335 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 DGAT2Q96PD7 388 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 ARL6Q9H0F7 186 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 FAM60AQ9NP50 221 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 CA10Q9NS85 328 aa11.57□□□□□ -0.56
LIG1-201ENST00000263274 TRAV1-2A0A0B4J238 106 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 A0A1W2PPL8 197 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 CDC14CA4D256 554 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 LYPD3O95274 346 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 CELA2BP08218 269 aaPredicted RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 ACAA2P42765 397 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 DIO1P49895 249 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 ZP1P60852 638 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 NFATC4Q14934 902 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 SFRP5Q5T4F7 317 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 SLC35D2Q76EJ3 337 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 TMED4Q7Z7H5 227 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 CA13Q8N1Q1 262 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 OR11G2Q8NGC1 345 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 NT5CQ8TCD5 201 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 NKD1Q969G9 470 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 STACQ99469 402 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms