RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 EMP2P54851 167 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 DCDP81605 110 aaKnown RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 E2F1Q01094 437 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 BIKQ13323 160 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 TPBGQ13641 420 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 PAPD4Q6PIY7 484 aaKnown RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 ARL9Q6T311 187 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 MARCH9Q86YJ5 346 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 LAX1Q8IWV1 398 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 CEP76Q8TAP6 659 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 TAAR8Q969N4 342 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 TMCO6Q96DC7 493 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 C4orf36Q96KX1 117 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 NXF2Q9GZY0 626 aaKnown RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 MRTO4Q9UKD2 239 aaKnown RBP12.35□□□□□ -0.43
VMP1-201ENST00000262291 CNTRLQ7Z7A1 2325 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 CACNA1CQ13936 2221 aa12.35□□□□□ -0.43
VMP1-201ENST00000262291 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 SELENOFO60613 162 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ALOX12BO75342 701 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 MTRF1O75570 445 aaKnown RBP12.34□□□□□ -0.43
VMP1-201ENST00000262291 SBK2P0C263 348 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 SLC2A5P22732 501 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ACVR1BP36896 505 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 GRK6P43250 576 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 SLC3A1Q07837 685 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ZNF74Q16587 644 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 TP53I3Q53FA7 332 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 FAM27D1Q5T7N8 215 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 RABEPKQ7Z6M1 372 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 PPP1R3BQ86XI6 285 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 APCDD1LQ8NCL9 501 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 FOXN4Q96NZ1 517 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 SMURF1Q9HCE7 757 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ZNF337Q9Y3M9 751 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
VMP1-201ENST00000262291 IFNGP01579 166 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 TFP02787 698 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 MYL9P24844 172 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ZNF85Q03923 595 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ARHGAP11AQ6P4F7 1023 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 SLITRK4Q8IW52 837 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 ZNF440Q8IYI8 595 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 OR13C5Q8NGS8 318 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 CRB3Q9BUF7 120 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 OR11A1Q9GZK7 315 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 HRH3Q9Y5N1 445 aa12.34□□□□□ -0.43
VMP1-201ENST00000262291 SLC22A31A6NKX4 558 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 B4DXG7 233 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 GPANK1O95872 356 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 PDGFAP04085 211 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 CELA2AP08217 269 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 EVI2BP34910 448 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 CDKN2AP42771 156 aaKnown RBP12.33□□□□□ -0.44
VMP1-201ENST00000262291 CTXN1P60606 82 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 TMEM44Q2T9K0 475 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 LEG1Q6P5S2 330 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 CDH24Q86UP0 819 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 OR5J2Q8NH18 312 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 METTL21AQ8WXB1 218 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 DACT3Q96B18 629 aaPredicted RBP12.33□□□□□ -0.44
VMP1-201ENST00000262291 LPAR4Q99677 370 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 LAT2Q9GZY6 243 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 A0A1W2PPK0 400 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 SNX4O95219 450 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 PNLIPP16233 465 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 CXCR1P25024 350 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 RORCP51449 518 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 CTAG1AP78358 180 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 ZNF441Q8N8Z8 693 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 NPEPL1Q8NDH3 523 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 C17orf47Q8NEP4 570 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 KCTD7Q96MP8 289 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 MMP25Q9NPA2 562 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 ZMIZ1Q9ULJ6 1067 aa12.33□□□□□ -0.44
VMP1-201ENST00000262291 GABRPO00591 440 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 AKAP8O43823 692 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 OPN1LWP04000 364 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 IL32P24001 234 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 GABRA5P31644 462 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 QPRTQ15274 297 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 TMPRSS11AQ6ZMR5 421 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 LSM14AQ8ND56 463 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.32□□□□□ -0.44
VMP1-201ENST00000262291 PPIL3Q9H2H8 161 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 SRA1Q9HD15 236 aaKnown RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 BABAM2Q9NXR7 383 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 NUP50Q9UKX7 468 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 NPFFR2Q9Y5X5 522 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 CASKO14936 926 aa12.32□□□□□ -0.44
VMP1-201ENST00000262291 TOX3O15405 576 aaPredicted RBP12.32□□□□□ -0.44
VMP1-201ENST00000262291 PPM1BO75688 479 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms