RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PIP5K1CO60331 668 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 MPZL2O60487 215 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 OR6B1O95007 311 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 SOX14O95416 240 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 UBL4AP11441 157 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 ENDOUP21128 410 aaKnown RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 POU1F1P28069 291 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 FMO3P31513 532 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 CEACAM8P31997 349 aaPredicted RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 SOX3P41225 446 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 RBM34P42696 430 aaKnown RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 IDH2P48735 452 aaKnown RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 CDK5Q00535 292 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 MVKQ03426 396 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 PRKCDQ05655 676 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 SKP2Q13309 424 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 NDUFAF6Q330K2 333 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 FOXB2Q5VYV0 432 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 TMEM236Q5W0B7 351 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 APOOLQ6UXV4 268 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 LINC00114Q6XXX2 140 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 BPIFB6Q8NFQ5 453 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 SMPDL3BQ92485 455 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
SGCA-201ENST00000262018 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 ZNF426Q9BUY5 554 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 LAT2Q9GZY6 243 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 DUSP21Q9H596 190 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 SCN3BQ9NY72 215 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 AASSQ9UDR5 926 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 TPRKBQ9Y3C4 175 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 NPFFR2Q9Y5X5 522 aa11.92□□□□□ -0.5
SGCA-201ENST00000262018 HEATR5AQ86XA9 2040 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 KDM4EB2RXH2 506 aaPredicted RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 ALG1L2C9J202 215 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 H3BN98 237 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 CASKO14936 926 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 ZNF264O43296 627 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 XPNPEP2O43895 674 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 HCN1O60741 890 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 ZNF354AO60765 605 aaPredicted RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 FBXO45P0C2W1 286 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 NAGAP17050 411 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 CNR1P21554 472 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 AGFG1P52594 562 aaKnown RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 CTBP2P56545 445 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 SNRPGP62308 76 aaKnown RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 EFR3AQ14156 821 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 ZNF791Q3KP31 576 aaPredicted RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 ULK3Q6PHR2 472 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 CCDC103Q8IW40 242 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 CLDN22Q8N7P3 220 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 PHOSPHO1Q8TCT1 267 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 DNAJA4Q8WW22 397 aaPredicted RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 IPCEF1Q8WWN9 437 aaPredicted RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 SPACA9Q96E40 222 aaPredicted RBP11.91□□□□□ -0.5
SGCA-201ENST00000262018 SGCZQ96LD1 299 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 UBTD1Q9HAC8 227 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 CNIH4Q9P003 139 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 RPS6KB2Q9UBS0 482 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 TMEM5Q9Y2B1 443 aa11.91□□□□□ -0.5
SGCA-201ENST00000262018 SH3D21A4FU49 640 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 GTPBP1O00178 669 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 OIP5O43482 229 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 FADS1O60427 444 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 FAM20BO75063 409 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 PPM1BO75688 479 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 IL2RAP01589 272 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 HTR1AP08908 422 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 EEF1B2P24534 225 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 GIPRP48546 466 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 SLC35A2P78381 396 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 NTRK2Q16620 822 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 SMN1Q16637 294 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 ALG10BQ5I7T1 473 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 DESI1Q6ICB0 168 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 RTL4Q6ZR62 310 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 TMPRSS11FQ6ZWK6 438 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 MEX3DQ86XN8 651 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 GATSQ8NAP1 163 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 PFN4Q8NHR9 129 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 TRUB1Q8WWH5 349 aaKnown RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 SGCDQ92629 289 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 DSN1Q9H410 356 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 PAK1IP1Q9NWT1 392 aaPredicted RBP11.9□□□□□ -0.5
SGCA-201ENST00000262018 IL20Q9NYY1 176 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 MED31Q9Y3C7 131 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 SNX5Q9Y5X3 404 aa11.9□□□□□ -0.5
SGCA-201ENST00000262018 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 TP53I11O14683 189 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 IFI30P13284 250 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 PAX7P23759 505 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms